RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 IFNA1P01562 189 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DLSTP36957 453 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TPMTP51580 245 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CDH13P55290 713 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TLE4Q04727 773 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FAM214AQ32MH5 1076 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KLHL22Q53GT1 634 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 N4BP2L1Q5TBK1 243 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ANKRD22Q5VYY1 191 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 WDR53Q7Z5U6 358 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KAT8Q9H7Z6 458 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 KIAA1257Q9ULG3 409 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHGB2Q9Y5G2 931 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HRO43593 1189 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 BMPR2Q13873 1038 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MAPKAPK3Q16644 382 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MTHFSDQ2M296 383 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FBXO47Q5MNV8 452 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 B3GNTL1Q67FW5 361 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MALSU1Q96EH3 234 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 REEP1Q9H902 201 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GINS2Q9Y248 185 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PTGES3LE9PB15 166 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 POLRMTO00411 1230 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ACSL4O60488 711 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 OR56A5P0C7T3 313 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ALAS2P22557 587 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GUCA1AP43080 201 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 C9orf135Q5VTT2 229 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 WDR74Q6RFH5 385 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TCEANCQ8N8B7 351 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM175Q9BSA9 504 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM184CQ9NVA4 438 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DCDC2CA8MYV0 355 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CCNB2O95067 398 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PLATP00750 562 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LTA4HP09960 611 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 AKR1B1P15121 316 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FNTBP49356 437 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PTP4A2Q12974 167 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LRRC38Q5VT99 294 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ZC3H14Q6PJT7 736 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 MRPS31Q92665 395 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FATE1Q969F0 183 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TXLNGYQ9BZA5 131 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GMEB2Q9UKD1 530 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 BEST1O76090 585 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FTH1P02794 183 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ALPPP05187 535 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PPP2R1BP30154 601 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM132BQ14DG7 1078 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PDK1Q15118 436 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CLLU1Q5K131 121 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PPP1R3BQ86XI6 285 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CASKIN2Q8WXE0 1202 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CDK5RAP1Q96SZ6 601 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 BRD7Q9NPI1 651 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 UCKL1Q9NWZ5 548 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ABI2Q9NYB9 513 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 GCNT4Q9P109 453 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 OGTO15294 1046 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 RAB7AP51149 207 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ACSBG2Q5FVE4 666 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FAM209AQ5JX71 171 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HACD2Q6Y1H2 254 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HID1Q8IV36 788 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM132CQ8N3T6 1108 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF561Q8N587 486 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FBXO36Q8NEA4 188 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LIN37Q96GY3 246 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DPAGT1Q9H3H5 408 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 A6NIZ1 184 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ABLIM3O94929 683 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 NR2F6P10588 404 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 EPHB2P29323 1055 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HMGCLP35914 325 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CLEC6AQ6EIG7 209 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CFAP161Q6P656 301 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SH3RF1Q7Z6J0 888 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 CLRN3Q8NCR9 226 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 NUFIP1Q9UHK0 495 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DRG1Q9Y295 367 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 HMGXB3Q12766 1538 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ASCC3Q8N3C0 2202 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 DUOX2Q9NRD8 1548 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PTPRKQ15262 1439 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 TRIM38O00635 465 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FGFR1P11362 822 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PCSK7Q16549 785 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 COMMD2Q86X83 199 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF548Q8NEK5 533 aaPredicted RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 LFNGQ8NES3 379 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ART4Q93070 314 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ZUFSPQ96AP4 578 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 FSD1LQ9BXM9 530 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 PDZD7Q9H5P4 517 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ALG13Q9NP73 1137 aaKnown RBP3.72□□□□□ -1.81
SYNE2-202ENST00000344113 SMCO4Q9NRQ5 59 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 IL19Q9UHD0 177 aa3.72□□□□□ -1.81
SYNE2-202ENST00000344113 ENTPD4Q9Y227 616 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms