RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GNPTGQ9UJJ9 305 aa18.78■□□□□ 0.6
SYNE4-202ENST00000340477 ZMIZ1Q9ULJ6 1067 aa18.78■□□□□ 0.6
SYNE4-202ENST00000340477 VPS9D1Q9Y2B5 631 aa18.78■□□□□ 0.6
SYNE4-202ENST00000340477 LOXL2Q9Y4K0 774 aa18.78■□□□□ 0.6
SYNE4-202ENST00000340477 RPS6KL1Q9Y6S9 549 aa18.78■□□□□ 0.6
SYNE4-202ENST00000340477 PRMT5O14744 637 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 HGSO14964 777 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 FANCGO15287 622 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 TTI1O43156 1089 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 CSF2RBP32927 897 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 LIMK2P53671 638 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 CKAP4Q07065 602 aaKnown RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 ZFP36L1Q07352 338 aaKnown RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 THOC5Q13769 683 aaKnown RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 BOP1Q14137 746 aaKnown RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 GPR18Q14330 331 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 MORF4L2Q15014 288 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 TMED2Q15363 201 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 PTRHD1Q6GMV3 140 aaKnown RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 MICALCLQ6ZW33 695 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 MAATS1Q7Z4T9 603 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 LRRC6Q86X45 466 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 GABPB2Q8TAK5 448 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-202ENST00000340477 STAMBPL1Q96FJ0 436 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 SNF8Q96H20 258 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 SEMA6CQ9H3T2 930 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 FRYQ5TBA9 3013 aa18.77■□□□□ 0.6
SYNE4-202ENST00000340477 KIF26BQ2KJY2 2108 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 IGHV5-10-1A0A0J9YXX1 117 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 UBA6A0AVT1 1052 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-202ENST00000340477 OR1I1O60431 355 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 DXOO77932 396 aaKnown RBP18.76■□□□□ 0.59
SYNE4-202ENST00000340477 THRAP10827 490 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 CSTF2P33240 577 aaKnown RBP eCLIP18.76■□□□□ 0.59
SYNE4-202ENST00000340477 SEMA3AQ14563 771 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 TBC1D25Q3MII6 688 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 ANKRD20A4Q4UJ75 823 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 IGF2-ASQ6U949 168 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 PDIK1LQ8N165 341 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 BBOF1Q8ND07 529 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 GPR150Q8NGU9 434 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 ZFPM2Q8WW38 1151 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 RMDN2Q96LZ7 410 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 PANX3Q96QZ0 392 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 INSM2Q96T92 566 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-202ENST00000340477 TCF12Q99081 682 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 TRIM51Q9BSJ1 452 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 NAT9Q9BTE0 207 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 MARCH4Q9P2E8 410 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-202ENST00000340477 PISDQ9UG56 409 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 CFAP20Q9Y6A4 193 aaKnown RBP18.76■□□□□ 0.59
SYNE4-202ENST00000340477 PRSS21Q9Y6M0 314 aa18.76■□□□□ 0.59
SYNE4-202ENST00000340477 EFCAB8A8MWE9 144 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 USP1O94782 785 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 TNFSF15O95150 251 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 ITGA2BP08514 1039 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 TYRP1P17643 537 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 PGAM1P18669 254 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 OGNP20774 298 aaKnown RBP18.75■□□□□ 0.59
SYNE4-202ENST00000340477 MAGEA3P43357 314 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 CAPZBP47756 277 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 CD151P48509 253 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 ERVPABLB-1P60509 514 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 SNAP47Q5SQN1 464 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 TMPRSS9Q7Z410 1059 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 LDB1Q86U70 411 aaPredicted RBP18.75■□□□□ 0.59
SYNE4-202ENST00000340477 PDZD3Q86UT5 571 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 AGBL5Q8NDL9 886 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 SPATA4Q8NEY3 305 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 GSDMBQ8TAX9 411 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 CALML6Q8TD86 181 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 TRIM31Q9BZY9 425 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 ASPMQ8IZT6 3477 aa18.75■□□□□ 0.59
SYNE4-202ENST00000340477 ACACAQ13085 2346 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 GOLGA8KD6RF30 607 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 H3BMM5 538 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 GOLGA8TH3BQL2 631 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 KIF2AO00139 706 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 RRP8O43159 456 aaKnown RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 TTC4O95801 387 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 TUBB4AP04350 444 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 APOA4P06727 396 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 HOXB3P14651 431 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 MPSTP25325 297 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 PREPP48147 710 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 EIF3BP55884 814 aaKnown RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 PCBP4P57723 403 aaKnown RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 LONRF1Q17RB8 773 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 TMEM164Q5U3C3 297 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 CAPRIN2Q6IMN6 1127 aaKnown RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 NEPROQ6NW34 567 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 ARMC6Q6NXE6 501 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 TMEM135Q86UB9 458 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 LMNTD2Q8IXW0 634 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 LILRA3Q8N6C8 439 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 RCBTB1Q8NDN9 531 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 SPDYE1Q8NFV5 336 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 FGF11Q92914 225 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 ZDHHC12Q96GR4 267 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms