RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ATN1P54259 1190 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SEMA3BQ13214 749 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CUL2Q13617 745 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ACOX1Q15067 660 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 BCL7AQ4VC05 210 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SH3PXD2AQ5TCZ1 1133 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ATF7IP2Q5U623 682 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LIPMQ5VYY2 423 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MFSD14CQ5VZR4 134 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CNSTQ6PJW8 725 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 THAP5Q7Z6K1 395 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CHPFQ8IZ52 775 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 AFAP1L2Q8N4X5 818 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MINDY1Q8N5J2 469 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SEPT1Q8WYJ6 367 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NELL1Q92832 810 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 REPS1Q96D71 796 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RBBP8Q99708 897 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 FEM1AQ9BSK4 669 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 KIFC1Q9BW19 673 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RANGRFQ9HD47 186 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 EGFL7Q9UHF1 273 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SNX6Q9UNH7 406 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PCDHGB3Q9Y5G1 929 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PDE4DIPQ5VU43 2346 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RNF103-CHMP3A0A140T963 221 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MAGEB16A2A368 324 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LINC00862A6NCI5 91 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 HMX3A6NHT5 357 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MEIS3P2A8K0S8 358 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 E9PQ18 207 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 GAS2O43903 313 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MAN1A2O60476 641 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF254O75437 659 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ALDOCP09972 364 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ITGB6P18564 788 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 UQCRC1P31930 480 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 DMP1Q13316 513 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 FZD5Q13467 585 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 GBX1Q14549 363 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LILRA6Q6PI73 481 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NECAB2Q7Z6G3 386 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NRARPQ7Z6K4 114 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 USP37Q86T82 979 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RAET1EQ8TD07 263 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TFAP2BQ92481 460 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 KHSRPQ92945 711 aaKnown RBP eCLIP5.51□□□□□ -1.532e-7■■■■□ 20
CSDE1-202ENST00000339438 LGALS12Q96DT0 336 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NRBF2Q96F24 287 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RHNO1Q9BSD3 238 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 DUSP21Q9H596 190 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CAB39LQ9H9S4 337 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF556Q9HAH1 456 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SCPEP1Q9HB40 452 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZBTB20Q9HC78 741 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PRDM8Q9NQV8 689 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 COMMD8Q9NX08 183 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TMPRSS11EQ9UL52 423 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 AKT3Q9Y243 479 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 A3GALT2U3KPV4 340 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MYO18AQ92614 2054 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PTPRBP23467 1997 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 FAM92AA1XBS5 289 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ASPDHA6ND91 283 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 EEF2KO00418 725 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NRP2O60462 931 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TPST1O60507 370 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CNTN5O94779 1100 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 VTNP04004 478 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 GPIP06744 558 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MYL3P08590 195 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MTHFD1P11586 935 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF250P15622 560 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 JUNDP17535 347 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CYP3A5P20815 502 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SFNP31947 248 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LSM3P62310 102 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SLC35A2P78381 396 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RHAGQ02094 409 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 UBE3AQ05086 875 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PRKAA1Q13131 559 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 IMPG1Q17R60 797 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZIK1Q3SY52 487 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NXNQ6DKJ4 435 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LRRC8EQ6NSJ5 796 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 METTL2BQ6P1Q9 378 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM270Q6UE05 265 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 BHLHA9Q7RTU4 235 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CCDC190Q86UF4 302 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CENPLQ8N0S6 344 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM130Q8N3G9 435 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 OR6J1Q8NGC5 347 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 STYXQ8WUJ0 223 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SLC7A6Q92536 515 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ROPN1LQ96C74 230 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NXNL1Q96CM4 212 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TRMT61AQ96FX7 289 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZBTB45Q96K62 511 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 UQCC2Q9BRT2 126 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms