RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CCDC189A1A4V9 331 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CHUKO15111 745 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 POP7O75817 140 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SLCO2B1O94956 709 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 HSPA4LO95757 839 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 DCNP07585 359 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MPC1LP0DKB6 136 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 KITP10721 976 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MYCLP1P12525 358 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 IMPDH1P20839 514 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PREPP48147 710 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PXNP49023 591 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CLDN2P57739 230 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 RCN2Q14257 317 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CFAP157Q5JU67 520 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 RPS27LQ71UM5 84 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SPEM1Q8N4L4 309 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FRMD1Q8N878 549 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 DLG3Q92796 817 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 APOOQ9BUR5 198 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 DRC3Q9H069 523 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 GULP1Q9UBP9 304 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SIT1Q9Y3P8 196 aa14.47□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SLC5A10A0PJK1 596 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 POM121BA6NF01 834 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 SIX3O95343 332 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CHRNGP07510 517 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OXTRP30559 389 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MTAPQ13126 283 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PPP1R3AQ16821 1122 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 FBXO48Q5FWF7 155 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 ZNF678Q5SXM1 525 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 RAB44Q7Z6P3 723 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 C11orf96Q7Z7L8 435 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CFAP206Q8IYR0 622 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 PPP4R1Q8TF05 950 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 L3HYPDHQ96EM0 354 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LINC00615Q96LM1 132 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 EBF2Q9HAK2 575 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 WSB2Q9NYS7 404 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 MARCOQ9UEW3 520 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 CA5BQ9Y2D0 317 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 DNAJC16Q9Y2G8 782 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 OARD1Q9Y530 152 aa14.46□□□□□ -0.09
CDK5RAP3-201ENST00000338399 LRRC14BA6NHZ5 514 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 KLK8O60259 260 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 NPHS1O60500 1241 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 SNX2O60749 519 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ZNF217O75362 1048 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 SUPT7LO94864 414 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 TGDSO95455 350 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 APBB3O95704 486 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 TROVE2P10155 538 aaKnown RBP eCLIP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 HNRNPA2B1P22626 353 aaKnown RBP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CD6P30203 668 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 RPS9P46781 194 aaKnown RBP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 HERVK_113P63132 956 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 PHKG1Q16816 387 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ZNF658BQ4V348 819 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 UNC50Q53HI1 259 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ARL13AQ5H913 290 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 NEK10Q6ZWH5 1172 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 UBE2R2Q712K3 238 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 LRRTM4Q86VH4 590 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CACNA2D3Q8IZS8 1091 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 LSMEM2Q8N112 164 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 FAM160A2Q8N612 972 aaPredicted RBP14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 DENND6BQ8NEG7 585 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 RFWD2Q8NHY2 731 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CNDP1Q96KN2 507 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 GPR174Q9BXC1 333 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ERVK-6Q9BXR3 956 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 TRIM55Q9BYV6 548 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 SHCBP1LQ9BZQ2 653 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 PNPOQ9NVS9 261 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 NUDT4Q9NZJ9 180 aa14.46□□□□□ -0.1
CDK5RAP3-201ENST00000338399 C17orf113A0A1B0GUU1 675 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 C10orf142B7Z368 130 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 H0Y8X5 98 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CACNB4O00305 520 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 FPGTO14772 594 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 FFAR2O15552 330 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 GRID2O43424 1007 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 LATO43561 262 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 FSBPO95073 299 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 GUCA1CO95843 209 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 PDHA2P29803 388 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ARHGAP8P85298 464 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ZXDAP98168 799 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ABRQ12979 859 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 KIAA0895LQ68EN5 471 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 ZNF781Q8N8C0 355 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 CCDC197Q8NCU1 140 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 OR2L2Q8NH16 312 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 GLMNQ92990 594 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 BMFQ96LC9 184 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 NECAB3Q96P71 396 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 GSTO2Q9H4Y5 243 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 COG4Q9H9E3 785 aa14.45□□□□□ -0.1
CDK5RAP3-201ENST00000338399 KLHL14Q9P2G3 628 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms