RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 HSPA14Q0VDF9 509 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 BOP1Q14137 746 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 KRT33BQ14525 404 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 PUM1Q14671 1186 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 BRD3Q15059 726 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 SEPT7Q16181 437 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 TTLL9Q3SXZ7 439 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 KBTBD12Q3ZCT8 623 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 CTSL3PQ5NE16 218 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 PLEKHS1Q5SXH7 462 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 GRTP1Q5TC63 336 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 GLRX5Q86SX6 157 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 TRIM48Q8IWZ4 208 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC35F3Q8IY50 421 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 NAGSQ8N159 534 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 PPM1NQ8N819 430 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 KCNJ9Q92806 393 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 INPP5DQ92835 1189 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 CXorf40BQ96DE9 158 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 CCDC77Q9BR77 488 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 AARSD1Q9BTE6 412 aaKnown RBP11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 WWP1Q9H0M0 922 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 TAS2R13Q9NYV9 303 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 LRIT1Q9P2V4 623 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 PSMD13Q9UNM6 376 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 HEBP2Q9Y5Z4 205 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 COLEC10Q9Y6Z7 277 aa11.67□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC5A10A0PJK1 596 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 EME2A4GXA9 379 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 A6NCN8 305 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 CXorf49A8MYA2 514 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 NUDT21O43809 227 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 NIPSNAP2O75323 286 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 GPC4O75487 556 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 EML2O95834 649 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 GLB1P16278 677 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 ACP1P24666 158 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 NDUFS1P28331 727 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 GP5P40197 560 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 NOVA1P51513 510 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC12A2P55011 1212 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 VSNL1P62760 191 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 E2F1Q01094 437 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 ILKQ13418 452 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 CLCA4Q14CN2 919 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 RPE65Q16518 533 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 KLHL38Q2WGJ6 581 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 CAPRIN2Q6IMN6 1127 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM45BPQ6NSW5 357 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 ZNF549Q6P9A3 640 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 RBM12BQ8IXT5 1001 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 ZBTB2Q8N680 514 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 GPATCH11Q8N954 259 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 KYQ8NBH2 561 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 BAHD1Q8TBE0 780 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 FAM45AQ8TCE6 357 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 ZFPM2Q8WW38 1151 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 VPS39Q96JC1 886 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 INSM2Q96T92 566 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 FUT8Q9BYC5 575 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 RHOJQ9H4E5 214 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 ACSS3Q9H6R3 686 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 RRAGDQ9NQL2 400 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 SMYD2Q9NRG4 433 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 DLL3Q9NYJ7 618 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 APOBEC2Q9Y235 224 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 WDR37Q9Y2I8 494 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 DHRS7Q9Y394 339 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 IKBKGQ9Y6K9 419 aa11.66□□□□□ -0.54
SPTLC1-202ENST00000337841 DCDC2BA2VCK2 349 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 RIPK2O43353 540 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PIAS1O75925 651 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SLCO2B1O94956 709 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 KCNK5O95279 499 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 F7P08709 466 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 ABHD2P08910 425 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 MYBL2P10244 700 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 MYF5P13349 255 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 BRAFP15056 766 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PNLIPP16233 465 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 CD9P21926 228 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PDHA2P29803 388 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC19A1P41440 591 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 MSH2P43246 934 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PREPP48147 710 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 MAZP56270 477 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SIM1P81133 766 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 HHEXQ03014 270 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 DNAJC3Q13217 504 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 ZNF658BQ4V348 819 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 HECTD2Q5U5R9 776 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 EMBQ6PCB8 327 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms