RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TJP3O95049 919 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 POLBP06746 335 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 MTHFD1P11586 935 aaKnown RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 CTSCP53634 463 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 EIF3EP60228 445 aaKnown RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 RPS15P62841 145 aaKnown RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 PRKAA1Q13131 559 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 TUBB3Q13509 450 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 LACTB2Q53H82 288 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 ANKRD20A2Q5SQ80 823 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 TMTC4Q5T4D3 741 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 ANKRD20A1Q5TYW2 823 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 ANKRD20A3Q5VUR7 823 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 RANBP10Q6VN20 620 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 THSD4Q6ZMP0 1018 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 FAM83HQ6ZRV2 1179 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 OOSP2Q86WS3 158 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 OR4K2Q8NGD2 314 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 OR2L2Q8NH16 312 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 HEXDCQ8WVB3 486 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 SEC14L1Q92503 715 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 KRT35Q92764 455 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 ULK4Q96C45 1275 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 C12orf66Q96MD2 445 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 CCM2Q9BSQ5 444 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 TWSG1Q9GZX9 223 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 WWP1Q9H0M0 922 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 LHX9Q9NQ69 397 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 FAM8A1Q9UBU6 413 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 CRLS1Q9UJA2 301 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 POLHQ9Y253 713 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 EFR3BQ9Y2G0 817 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 HEBP2Q9Y5Z4 205 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 MRPS18BQ9Y676 258 aaKnown RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 CFAP20Q9Y6A4 193 aaKnown RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 MYO18BQ8IUG5 2567 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 BSNQ9UPA5 3926 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 CCDC66A2RUB6 948 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 CDC14CA4D256 554 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 GOLGA6L3A6NEY3 463 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 TLCD2A6NGC4 264 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 C21orf140B9A014 251 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 GPR39O43194 453 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 CREG1O75629 220 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 ZBTB11O95625 1053 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 RECKO95980 971 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 NTRK1P04629 796 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 RBP3P10745 1247 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 FOLR1P15328 257 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 F8A1P23610 371 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 NDUFS1P28331 727 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 HADHAP40939 763 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 CASRP41180 1078 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 RWDD2BP57060 319 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 TMPRSS15P98073 1019 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 OTUD4Q01804 1114 aaKnown RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 KCNAB1Q14722 419 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 PTPRCAPQ14761 206 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 SKIDA1Q1XH10 827 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 ATP1A1-AS1Q5TC04 95 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 SARM1Q6SZW1 724 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 TEX19Q8NA77 164 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 GPR150Q8NGU9 434 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 ACTL9Q8TC94 416 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 SLC41A2Q96JW4 573 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 ALS2CR12Q96Q35 445 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 INSM2Q96T92 566 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 MAP3K3Q99759 626 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 APOL2Q9BQE5 337 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 GPR87Q9BY21 358 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 OSBPL8Q9BZF1 889 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 C10orf88Q9H8K7 445 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 FGF21Q9NSA1 209 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 FEZ2Q9UHY8 353 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 TFR2Q9UP52 801 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 KCNMB2Q9Y691 235 aa10.41□□□□□ -0.74
CAPN3-202ENST00000337571 EPN1Q9Y6I3 576 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 FLNBO75369 2602 aaKnown RBP10.41□□□□□ -0.74
CAPN3-202ENST00000337571 UBR5O95071 2799 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-202ENST00000337571 OR6C74A6NCV1 312 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 GOLGA6L9A6NEM1 432 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 OR5K3A6NET4 321 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 IFRD1O00458 451 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-202ENST00000337571 SCRG1O75711 98 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 KLK3P07288 261 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-202ENST00000337571 EBLN1P0CF75 366 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 ATP1B2P14415 290 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-202ENST00000337571 ITGALP20701 1170 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 PPP1CAP62136 330 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 KLRB1Q12918 225 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 DNASE1L3Q13609 305 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 BCL7AQ4VC05 210 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 PWWP2BQ6NUJ5 590 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 TMTC1Q8IUR5 882 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 TMEM126BQ8IUX1 230 aa10.4□□□□□ -0.74
CAPN3-202ENST00000337571 CARFQ8N187 725 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms