RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

TSL 1 (best) BASIC

Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.3□□□□□ -0.76
SSX2-201ENST00000336777 SLC46A1Q96NT5 459 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 INSM2Q96T92 566 aaPredicted RBP10.3□□□□□ -0.76
SSX2-201ENST00000336777 CMKLR1Q99788 373 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 CTRCQ99895 268 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 HGH1Q9BTY7 390 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 COG4Q9H9E3 785 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 OCIAD1Q9NX40 245 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 ASIC3Q9UHC3 531 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 PCDHGA8Q9Y5G5 932 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 LOC400499M0QZD8 3231 aa10.3□□□□□ -0.76
SSX2-201ENST00000336777 IGLV3-16A0A075B6K0 115 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 OR5K4A6NMS3 321 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 AGAP14A8MT82 685 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 IQCF5A8MTL0 148 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 C3orf80F5H4A9 247 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 RRP8O43159 456 aaKnown RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 KLK10O43240 276 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 KIF1CO43896 1103 aaKnown RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 BANF1O75531 89 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 MTHFD1P11586 935 aaKnown RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 TPSB2P20231 275 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ADRA1DP25100 572 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 PDHA2P29803 388 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 SLC5A2P31639 672 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 CSTF2P33240 577 aaKnown RBP eCLIP10.29□□□□□ -0.76
SSX2-201ENST00000336777 CAPZBP47756 277 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 EIF3IQ13347 325 aaKnown RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 PPP1R7Q15435 360 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 TGIF1Q15583 401 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 TPSAB1Q15661 275 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 GPR33Q49SQ1 333 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 FASTKD1Q53R41 847 aaKnown RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 AGAP9Q5VTM2 703 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 TMEM71Q6P5X7 295 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ABRAXAS1Q6UWZ7 409 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ZFAND4Q86XD8 727 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 LSMEM2Q8N112 164 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ZNF248Q8NDW4 579 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 OR2L2Q8NH16 312 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 OR4L1Q8NH43 312 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ACTRT1Q8TDG2 376 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 UBE2Q2Q8WVN8 375 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ELMO1Q92556 727 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 USP7Q93009 1102 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 SH3KBP1Q96B97 665 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 MFSD3Q96ES6 412 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 ZNF514Q96K75 400 aaPredicted RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 ZNF578Q96N58 590 aaPredicted RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 RANBP9Q96S59 729 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 NAP1L3Q99457 506 aaPredicted RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 NAPGQ99747 312 aaPredicted RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 NPDC1Q9NQX5 325 aaPredicted RBP10.29□□□□□ -0.76
SSX2-201ENST00000336777 HOMER3Q9NSC5 361 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 CATSPERZQ9NTU4 200 aa10.29□□□□□ -0.76
SSX2-201ENST00000336777 UBA6A0AVT1 1052 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 CDRT15L2A8MXV6 281 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 C9orf172C9J069 976 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 CAPN5O15484 640 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 DXOO77932 396 aaKnown RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 TCP1P17987 556 aaKnown RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 XRCC1P18887 633 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 EPHA4P54764 986 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 CXADRP78310 365 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 MRPS25P82663 173 aaKnown RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 TLE3Q04726 772 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 COL9A2Q14055 689 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 KRT33BQ14525 404 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 CYP1B1Q16678 543 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 PCID2Q5JVF3 399 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 METRNLQ641Q3 311 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 ANKS6Q68DC2 871 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 VASH2Q86V25 355 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 KRT222Q8N1A0 295 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 ZNF669Q96BR6 464 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 FAM136AQ96C01 138 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 TRIM51Q9BSJ1 452 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 IL22Q9GZX6 179 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 CPNE5Q9HCH3 593 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 APMAPQ9HDC9 416 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 BFARQ9NZS9 450 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 AKAP7Q9P0M2 348 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 CIDEBQ9UHD4 219 aa10.28□□□□□ -0.76
SSX2-201ENST00000336777 MN1Q10571 1320 aaPredicted RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 URB1O60287 2271 aaKnown RBP10.28□□□□□ -0.76
SSX2-201ENST00000336777 SMG1Q96Q15 3661 aaKnown RBP10.27□□□□□ -0.76
SSX2-201ENST00000336777 CHD6Q8TD26 2715 aa10.27□□□□□ -0.76
SSX2-201ENST00000336777 A0A087WV48 116 aa10.27□□□□□ -0.77
SSX2-201ENST00000336777 TMX2-CTNND1H3BSU7 103 aa10.27□□□□□ -0.77
SSX2-201ENST00000336777 HGSO14964 777 aaPredicted RBP10.27□□□□□ -0.77
SSX2-201ENST00000336777 VAPBO95292 243 aa10.27□□□□□ -0.77
SSX2-201ENST00000336777 FGF3P11487 239 aaPredicted RBP10.27□□□□□ -0.77
SSX2-201ENST00000336777 ARNTP27540 789 aa10.27□□□□□ -0.77
SSX2-201ENST00000336777 NSG1P42857 185 aa10.27□□□□□ -0.77
SSX2-201ENST00000336777 FNTAP49354 379 aa10.27□□□□□ -0.77
SSX2-201ENST00000336777 EIF3BP55884 814 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms