RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ERVFC1P60507 584 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 YBX1P67809 324 aaKnown RBP17.11■□□□□ 0.33
DDX28-201ENST00000332395 PTSQ03393 145 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 TRAF3Q13114 568 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 PDK3Q15120 406 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 CARD16Q5EG05 197 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 DPY19L3Q6ZPD9 716 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 SFRP1Q8N474 314 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 HBEGFQ99075 208 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 ZIM2Q9NZV7 527 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 PIKFYVEQ9Y2I7 2098 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 EEDO75530 441 aaKnown RBP17.11■□□□□ 0.33
DDX28-201ENST00000332395 UGT2B4P06133 528 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 ATP6V1B2P21281 511 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 POLR2JP52435 117 aaKnown RBP17.11■□□□□ 0.33
DDX28-201ENST00000332395 NFYCQ13952 458 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 TLR1Q15399 786 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 TBC1D25Q3MII6 688 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 TTLL9Q3SXZ7 439 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 OR2T34Q8NGX1 318 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 OR2T3Q8NH03 318 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 LRTOMTQ8WZ04 291 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 BBS2Q9BXC9 721 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 CEP44Q9C0F1 390 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 ZDHHC3Q9NYG2 299 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 SLCO3A1Q9UIG8 710 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 RAB26Q9ULW5 256 aa17.11■□□□□ 0.33
DDX28-201ENST00000332395 CCDC154A6NI56 674 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 DENRO43583 198 aaKnown RBP17.1■□□□□ 0.33
DDX28-201ENST00000332395 POP4O95707 220 aaKnown RBP17.1■□□□□ 0.33
DDX28-201ENST00000332395 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
DDX28-201ENST00000332395 GRIA3P42263 894 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 GJA8P48165 433 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 TEAD2Q15562 447 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 ATP13A5Q4VNC0 1218 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 PAGE3Q5JUK9 113 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 RFLNAQ6ZTI6 216 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 MILR1Q7Z6M3 343 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 RHBDF1Q96CC6 855 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 TMEM79Q9BSE2 394 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 TRIM54Q9BYV2 358 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 Q9H521 79 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 IL23AQ9NPF7 189 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 LATS2Q9NRM7 1088 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 WWOXQ9NZC7 414 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 SUN2Q9UH99 717 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 PCDHA9Q9Y5H5 950 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 IRAK3Q9Y616 596 aa17.1■□□□□ 0.33
DDX28-201ENST00000332395 RFPL2O75678 378 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 PABPC1P11940 636 aaKnown RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 IL12AP29459 219 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 HMOX2P30519 316 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 BNIP2Q12982 314 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ABRAXAS2Q15018 415 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 CRY1Q16526 586 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 PLPP4Q5VZY2 271 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 SULT1C3Q6IMI6 304 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 Q6ZVU0 165 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 MARVELD2Q8N4S9 558 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 PROKR1Q8TCW9 393 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ZUFSPQ96AP4 578 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 EME1Q96AY2 570 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ZNF641Q96N77 438 aaPredicted RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 COPS8Q99627 209 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 EFHD1Q9BUP0 239 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 CD244Q9BZW8 370 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ABCG8Q9H221 673 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 SEMA6AQ9H2E6 1030 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 HEBP1Q9NRV9 189 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 TMEM45AQ9NWC5 275 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 OPTCQ9UBM4 332 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ZMYM5Q9UJ78 669 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 LEF1Q9UJU2 399 aaPredicted RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 ANGPTL3Q9Y5C1 460 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 COMMD3-BMI1R4GMX3 469 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 PLXNB3Q9ULL4 1909 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 FAM234BA2RU67 622 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ZNF839A8K0R7 811 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 LSM1O15116 133 aaKnown RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 MOSPD3O75425 235 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 GDF5P43026 501 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 EPHA5P54756 1037 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 B4GALNT1Q00973 533 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 NR6A1Q15406 480 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 TIGD2Q4W5G0 525 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 LRRC23Q53EV4 343 aaPredicted RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 LRRC73Q5JTD7 316 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 ST13P4Q8IZP2 240 aaPredicted RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 GALNT4Q8N4A0 578 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 CHCHD4Q8N4Q1 142 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 CHST14Q8NCH0 376 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 DNAJB14Q8TBM8 379 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 IRF7Q92985 503 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 TMEM125Q96AQ2 219 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
DDX28-201ENST00000332395 TRIM8Q9BZR9 551 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 RDH14Q9HBH5 336 aa17.09■□□□□ 0.33
DDX28-201ENST00000332395 KCTD5Q9NXV2 234 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms