RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 AP5B1Q2VPB7 878 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 DENND1CQ8IV53 801 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 OR4F6Q8NGB9 312 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 MIPOL1Q8TD10 442 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 NUDT8Q8WV74 236 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 TUBA1CQ9BQE3 449 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 NACA2Q9H009 215 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 A0A1W2PPW3 197 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ILVBLA1L0T0 632 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 SLC38A8A6NNN8 435 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 H7C0S8 307 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 OR7A17O14581 309 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ANKRD28O15084 1053 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 MAGEB3O15480 346 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 FOXD2O60548 495 aaPredicted RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 KATNA1O75449 491 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 GMNNO75496 209 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 PRSS23O95084 383 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 CNPP09543 421 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 PCNAP12004 261 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 GGT1P19440 569 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 NFKBIAP25963 317 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ELK4P28324 431 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 PLIN5Q00G26 463 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 CHRNB3Q05901 458 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ZNF177Q13360 481 aaPredicted RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 GTF2H2Q13888 395 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 DAG1Q14118 895 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 AAK1Q2M2I8 961 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 RFTN2Q52LD8 501 aaPredicted RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 GTF2H2CQ6P1K8 395 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 CLEC4FQ8N1N0 589 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 TTC30BQ8N4P2 665 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 NAA50Q9GZZ1 169 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 TSR3Q9UJK0 312 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 DHRS7Q9Y394 339 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 POLR3HQ9Y535 204 aaPredicted RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 GPR39O43194 453 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 RSL1D1O76021 490 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 EEF1B2P24534 225 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ABRAXAS2Q15018 415 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 FGD3Q5JSP0 725 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ZNF773Q6PK81 442 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 ITIH5Q86UX2 942 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 STK32CQ86UX6 486 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 STK40Q8N2I9 435 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 AADATQ8N5Z0 425 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 PDPRQ8NCN5 879 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 PDLIM5Q96HC4 596 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 CNDP2Q96KP4 475 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 CDK5RAP1Q96SZ6 601 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 P2RY12Q9H244 342 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 PAK6Q9NQU5 681 aaPredicted RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 DNAAF2Q9NVR5 837 aaKnown RBP15.12■□□□□ 0.01
BRCC3-201ENST00000330045 LMCD1Q9NZU5 365 aa15.12■□□□□ 0.01
BRCC3-201ENST00000330045 NT5C1B-RDH14C9J2C7 533 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 KCNH1O95259 989 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 CPNE6O95741 557 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 ALPLP05186 524 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 THRBP10828 461 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 JAK1P23458 1154 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 POLR2IP36954 125 aaKnown RBP15.11■□□□□ 0.01
BRCC3-201ENST00000330045 SGSHP51688 502 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 GRSF1Q12849 480 aaKnown RBP eCLIP15.11■□□□□ 0.01
BRCC3-201ENST00000330045 TRAF2Q12933 501 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 FAM117BQ6P1L5 589 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 ADAMTSL2Q86TH1 951 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 OR8J3Q8NGG0 315 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 ZNF583Q96ND8 569 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 C17orf80Q9BSJ5 609 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 ING2Q9H160 280 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 TMEM9Q9P0T7 183 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 TRIM64BA6NI03 449 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 B4GAT1O43505 415 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 NOL3O60936 208 aaKnown RBP15.11■□□□□ 0.01
BRCC3-201ENST00000330045 GJB5O95377 273 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 OTCP00480 354 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 S100BP04271 92 aaPredicted RBP15.11■□□□□ 0.01
BRCC3-201ENST00000330045 TCF3P15923 654 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 SHMT2P34897 504 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 MTHFRP42898 656 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 SBSNQ6UWP8 590 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 MILR1Q7Z6M3 343 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 IPPKQ9H8X2 491 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 MAGED1Q9Y5V3 778 aaPredicted RBP15.11■□□□□ 0.01
BRCC3-201ENST00000330045 SLC30A1Q9Y6M5 507 aa15.11■□□□□ 0.01
BRCC3-201ENST00000330045 PRMT5O14744 637 aaPredicted RBP15.1■□□□□ 0.01
BRCC3-201ENST00000330045 FFAR2O15552 330 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 MBL2P11226 248 aaPredicted RBP15.1■□□□□ 0.01
BRCC3-201ENST00000330045 CCL5P13501 91 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 ATF6P18850 670 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 CACNG1Q06432 222 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 SMARCB1Q12824 385 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 TMEM173Q86WV6 379 aaPredicted RBP15.1■□□□□ 0.01
BRCC3-201ENST00000330045 ZDHHC13Q8IUH4 622 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 OR13F1Q8NGS4 319 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 FIG4Q92562 907 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 PPP1R14BQ96C90 147 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms