RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 TLR9Q9NR96 1032 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 IFT80Q9P2H3 777 aaPredicted RBP19.58■□□□□ 0.72
SOX2-201ENST00000325404 HCSTQ9UBK5 93 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 ASB1Q9Y576 335 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 ACTL7AQ9Y615 435 aa19.58■□□□□ 0.72
SOX2-201ENST00000325404 VWA8A3KMH1 1905 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 ATE1O95260 518 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CLIC3O95833 236 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 OTCP00480 354 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 ALPLP05186 524 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CAPN1P07384 714 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 ELAVL2Q12926 359 aaKnown RBP19.57■□□□□ 0.72
SOX2-201ENST00000325404 KIAA0040Q15053 153 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 ZRANB3Q5FWF4 1079 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 RBM48Q5RL73 367 aaKnown RBP19.57■□□□□ 0.72
SOX2-201ENST00000325404 FUT10Q6P4F1 479 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 TBPL2Q6SJ96 375 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CERS6Q6ZMG9 384 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 Q6ZNX1 250 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 ITFG1Q8TB96 612 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 OVCA2Q8WZ82 227 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 SEPT5Q99719 369 aaPredicted RBP19.57■□□□□ 0.72
SOX2-201ENST00000325404 C19orf43Q9BQ61 176 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 TMEM175Q9BSA9 504 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 GMNNO75496 209 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 STT3AP46977 705 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CHRNB3Q05901 458 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CACNG1Q06432 222 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 METTL2BQ6P1Q9 378 aaKnown RBP19.57■□□□□ 0.72
SOX2-201ENST00000325404 OR13F1Q8NGS4 319 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 PLD4Q96BZ4 506 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CRISPLD1Q9H336 500 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 SMPD4Q9NXE4 827 aa19.57■□□□□ 0.72
SOX2-201ENST00000325404 CROCCQ5TZA2 2017 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 SLC38A8A6NNN8 435 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 RHOCP08134 193 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 MBL2P11226 248 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 G6PDP11413 515 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 TLE2Q04725 743 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 MAD2L1Q13257 205 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 ZNF177Q13360 481 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 ZNF829Q3KNS6 432 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 IL27RAQ6UWB1 636 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 GOLGA7Q7Z5G4 137 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 DEFB128Q7Z7B8 93 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 MIPOL1Q8TD10 442 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 B3GALT6Q96L58 329 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 H7C4K7 107 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 OR7A17O14581 309 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 KATNA1O75449 491 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 GLUD1P00367 558 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 S100BP04271 92 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 GALTP07902 379 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 THRBP10828 461 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 RPS3P23396 243 aaKnown RBP eCLIP19.56■□□□□ 0.72
SOX2-201ENST00000325404 ENTPD1P49961 510 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 GTF2H2Q13888 395 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 TRIM60Q495X7 471 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 PYCR3Q53H96 274 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 TTC23Q5W5X9 447 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 GTF2H2CQ6P1K8 395 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 ZNF783Q6ZMS7 281 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 GLB1L3Q8NCI6 653 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 PDZD8Q8NEN9 1154 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 THAP11Q96EK4 314 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 ZNF583Q96ND8 569 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 TOX2Q96NM4 488 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 USP22Q9UPT9 525 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 CCL27Q9Y4X3 112 aa19.56■□□□□ 0.72
SOX2-201ENST00000325404 HEMK1Q9Y5R4 338 aaPredicted RBP19.56■□□□□ 0.72
SOX2-201ENST00000325404 PRMT5O14744 637 aaPredicted RBP19.55■□□□□ 0.72
SOX2-201ENST00000325404 KCNH1O95259 989 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 AP5B1Q2VPB7 878 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 BROXQ5VW32 411 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 GPR107Q5VW38 600 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 ELMSAN1Q6PJG2 1045 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 SBSNQ6UWP8 590 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 RNF19BQ6ZMZ0 732 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 BORCS5Q969J3 196 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 TMBIM1Q969X1 311 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 ZBTB18Q99592 522 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 ASIC5Q9NY37 505 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 USE1Q9NZ43 259 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 PCDHGC4Q9Y5F7 938 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 SCN5AQ14524 2016 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 A0A1B0GVM2 712 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 NT5C1B-RDH14C9J2C7 533 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 RAD51BO15315 384 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 NOL3O60936 208 aaKnown RBP19.55■□□□□ 0.72
SOX2-201ENST00000325404 SEC14L2O76054 403 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 ARPP19P56211 112 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 RPS24P62847 133 aaKnown RBP19.55■□□□□ 0.72
SOX2-201ENST00000325404 NR6A1Q15406 480 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 NCEH1Q6PIU2 408 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 FRA10AC1Q70Z53 315 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 THAP5Q7Z6K1 395 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 RALGPS2Q86X27 583 aaPredicted RBP19.55■□□□□ 0.72
SOX2-201ENST00000325404 SVOPLQ8N434 492 aa19.55■□□□□ 0.72
SOX2-201ENST00000325404 OR4F6Q8NGB9 312 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms