RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PMF1-BGLAPU3KQ54 211 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 PITPNM1O00562 1244 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 BLMHQ13867 455 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 ADGRE1Q14246 886 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 DUSP28Q4G0W2 176 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 C2orf73Q8N5S3 287 aaPredicted RBP20.77■□□□□ 0.92
RNF40-201ENST00000324685 OR2L5Q8NG80 312 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 OR8H1Q8NGG4 311 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 TNFRSF25Q93038 417 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 TLCD1Q96CP7 247 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 FETUBQ9UGM5 382 aa20.77■□□□□ 0.92
RNF40-201ENST00000324685 EIPR1Q53HC9 387 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ANKRD22Q5VYY1 191 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 MSANTD2Q6P1R3 559 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 AZIN2Q96A70 460 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 INTS10Q9NVR2 710 aaKnown RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 ZNF224Q9NZL3 707 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ZNF282Q9UDV7 671 aaPredicted RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 OR4F21O95013 312 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ESR1P03372 595 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 FASTKD3Q14CZ7 662 aaKnown RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 TCEAL6Q6IPX3 200 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 SERPINA9Q86WD7 417 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ERVW-1Q9UQF0 538 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ZFP37Q9Y6Q3 630 aaPredicted RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 AGLP35573 1532 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ZNF99A8MXY4 864 aaPredicted RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 SLC35G6P0C7Q6 338 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 PEX2P28328 305 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 HEPACAMQ14CZ8 416 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 GRIK5Q16478 980 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ZDHHC21Q8IVQ6 265 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 LRRC57Q8N9N7 239 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 RAB2BQ8WUD1 216 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ST6GALNAC4Q9H4F1 302 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 PDZD7Q9H5P4 517 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 GIN1Q9NXP7 522 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 RAP2AP10114 183 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 NMBRP28336 390 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 PTGER3P43115 390 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ATXN1P54253 815 aaKnown RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 TATDN1Q6P1N9 297 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 OR10A6Q8NH74 314 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 C8orf48Q96LL4 319 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 NIFKQ9BYG3 293 aaKnown RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 C1orf109Q9NX04 203 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 PTTG2Q9NZH5 202 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 TESMINQ9Y4I5 508 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 TCRBV7S2A1N4TA0A589 114 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 TRIM3O75382 744 aaPredicted RBP20.76■□□□□ 0.91
RNF40-201ENST00000324685 NOL4O94818 638 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 GADD45GO95257 159 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 SERPINA3P01011 423 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 SNAP47Q5SQN1 464 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 OR4C6Q8NH72 309 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 TOP1MTQ969P6 601 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 PLD4Q96BZ4 506 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 CCDC115Q96NT0 180 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 ACSS2Q9NR19 701 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 DNAJB9Q9UBS3 223 aa20.76■□□□□ 0.91
RNF40-201ENST00000324685 PRAMEF33A0A0G2JMD5 474 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 A0A1B0GVM2 712 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 DPPA5A6NC42 116 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 TCAF2A6NFQ2 919 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 MATN2O00339 956 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 TLL1O43897 1013 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 PRAMEF10O60809 474 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 CLUP10909 449 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 IL10RBQ08334 325 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 TAF1AQ15573 450 aaPredicted RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 PSRC1Q6PGN9 363 aaPredicted RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 GTPBP3Q969Y2 492 aaKnown RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 KMOO15229 486 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 DRICH1Q6PGQ1 229 aaPredicted RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 SAMD14Q8IZD0 417 aaPredicted RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 GRPEL2Q8TAA5 225 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 MFSD3Q96ES6 412 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 SLC35G5Q96KT7 338 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 HNRNPABQ99729 332 aaKnown RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 OSER1Q9NX31 292 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 PCDHGA3Q9Y5H0 932 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 EME2A4GXA9 379 aaPredicted RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 NT5C1B-RDH14C9J2C7 533 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 hCG_2039718K7EN88 272 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 GALNT7Q86SF2 657 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 LDB1Q86U70 411 aaPredicted RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 HMCESQ96FZ2 354 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 CEP295NLQ96MC4 621 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 FZD10Q9ULW2 581 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 POP4O95707 220 aaKnown RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 HSPB3Q12988 150 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 IRF2BP1Q8IU81 584 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 SLITRK4Q8IW52 837 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 CERS5Q8N5B7 392 aa20.75■□□□□ 0.91
RNF40-201ENST00000324685 RUVBL1Q9Y265 456 aaKnown RBP20.75■□□□□ 0.91
RNF40-201ENST00000324685 ANXA2P2A6NMY6 339 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 ANXA2P07355 339 aaKnown RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 TMEM139Q8IV31 216 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 CFAP206Q8IYR0 622 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms