RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 KIF26BQ2KJY2 2108 aa18.31■□□□□ 0.52
CIRBP-201ENST00000320936 PRAMEF33A0A0G2JMD5 474 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 C17orf113A0A1B0GUU1 675 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 LILRA5A6NI73 299 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 SMAPO00193 183 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 IFRD1O00458 451 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 PRMT5O14744 637 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 USP1O94782 785 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 MPOP05164 745 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 CSF2RBP32927 897 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 EPHA4P54764 986 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 CSE1LP55060 971 aaKnown RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 ARL4CP56559 192 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 GABREP78334 506 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 CALCOCO2Q13137 446 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 GPR18Q14330 331 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 LONRF1Q17RB8 773 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 WHAMMP3Q1A5X7 153 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 HP1BP3Q5SSJ5 553 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 RNF187Q5TA31 235 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 HIBCHQ6NVY1 386 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 NEPROQ6NW34 567 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 NAPRTQ6XQN6 538 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 RBM12BQ8IXT5 1001 aaKnown RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 AGGF1Q8N302 714 aaeCLIP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 BBOF1Q8ND07 529 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 MDM1Q8TC05 714 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 NCSTNQ92542 709 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 GRAMD1AQ96CP6 724 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 CFAP36Q96G28 342 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 INSM2Q96T92 566 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 SLC40A1Q9NP59 571 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 GNPTGQ9UJJ9 305 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 SATB2Q9UPW6 733 aa18.3■□□□□ 0.52
CIRBP-201ENST00000320936 MAP1BP46821 2468 aaKnown RBP18.3■□□□□ 0.52
CIRBP-201ENST00000320936 LIN7AO14910 233 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-201ENST00000320936 UBXN7O94888 489 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 TUBB4AP04350 444 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 TYRP1P17643 537 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 AMD1P17707 334 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 MPSTP25325 297 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 ARCN1P48444 511 aaKnown RBP18.29■□□□□ 0.52
CIRBP-201ENST00000320936 CYP4F3Q08477 520 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 CRYMQ14894 314 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 MSS51Q4VC12 460 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 SNAP47Q5SQN1 464 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 TMPRSS9Q7Z410 1059 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 TMEM135Q86UB9 458 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
CIRBP-201ENST00000320936 JPH3Q8WXH2 748 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-201ENST00000320936 TMEM159Q96B96 161 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 PWWP2AQ96N64 755 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 ERP44Q9BS26 406 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-201ENST00000320936 NRSN2Q9GZP1 204 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 SEMA6CQ9H3T2 930 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 UCK1Q9HA47 277 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 CHMP2BQ9UQN3 213 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 UTP11Q9Y3A2 253 aaKnown RBP18.29■□□□□ 0.52
CIRBP-201ENST00000320936 HEBP2Q9Y5Z4 205 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 FREM2Q5SZK8 3169 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 WDFY3Q8IZQ1 3526 aa18.29■□□□□ 0.52
CIRBP-201ENST00000320936 CCDC187A0A096LP49 1063 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 TMEM8BA6NDV4 472 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 PROS1P07225 676 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 OGNP20774 298 aaKnown RBP18.28■□□□□ 0.52
CIRBP-201ENST00000320936 CCKBRP32239 447 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 RPA4Q13156 261 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 TMED2Q15363 201 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 CLPPQ16740 277 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-201ENST00000320936 LRRC6Q86X45 466 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 WDR36Q8NI36 951 aaKnown RBP18.28■□□□□ 0.52
CIRBP-201ENST00000320936 CCDC74BQ96LY2 380 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 EBNA1BP2Q99848 306 aaKnown RBP18.28■□□□□ 0.52
CIRBP-201ENST00000320936 DPYSL5Q9BPU6 564 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 NAT9Q9BTE0 207 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 RAB17Q9H0T7 212 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 EPB41L1Q9H4G0 881 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 AKAP7Q9P0M2 348 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-201ENST00000320936 KLHL3Q9UH77 587 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 VPS9D1Q9Y2B5 631 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 COLEC10Q9Y6Z7 277 aa18.28■□□□□ 0.52
CIRBP-201ENST00000320936 ZCWPW2A0A1B0GU75 182 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 IQCF5A8MTL0 148 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 BRINP1O60477 761 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 TTC4O95801 387 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 HOXB3P14651 431 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-201ENST00000320936 PDHA2P29803 388 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 FMO4P31512 558 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 ELK3P41970 407 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 TYSND1Q2T9J0 566 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 C8orf74Q6P047 294 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 XKR5Q6UX68 686 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 RAB11FIP2Q7L804 512 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 ZNF572Q7Z3I7 529 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-201ENST00000320936 PDZD3Q86UT5 571 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 KCNMB4Q86W47 210 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 CILP2Q8IUL8 1156 aa18.27■□□□□ 0.52
CIRBP-201ENST00000320936 SLITRK4Q8IW52 837 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms