RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 KLHL4Q9C0H6 718 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 COPS7BQ9H9Q2 264 aaPredicted RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 PIDD1Q9HB75 910 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 MRPL40Q9NQ50 206 aaKnown RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 RIC8BQ9NVN3 520 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 SARDHQ9UL12 918 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 OBSL1O75147 1896 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 BBIP1A8MTZ0 92 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 DNAJA2O60884 412 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 MATN4O95460 622 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 HOXA9P31269 272 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 PSMD8P48556 350 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 PIK3CGP48736 1102 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 UFM1P61960 85 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 BLMHQ13867 455 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 CAPRIN1Q14444 709 aaKnown RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 DMC1Q14565 340 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 SFT2D3Q587I9 215 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 BRAT1Q6PJG6 821 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 BLOC1S3Q6QNY0 202 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 Q6ZVL8 140 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 ITFG1Q8TB96 612 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 ROPN1LQ96C74 230 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 RHBDF1Q96CC6 855 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 SPDL1Q96EA4 605 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 LRGUKQ96M69 825 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 TRIM8Q9BZR9 551 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 VCX3BQ9H321 246 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 C6orf203Q9P0P8 240 aaPredicted RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 TMEM181Q9P2C4 612 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 OPTCQ9UBM4 332 aa7.44□□□□□ -1.22
IFT88-201ENST00000319980 SUCOQ9UBS9 1254 aaKnown RBP7.44□□□□□ -1.22
IFT88-201ENST00000319980 FFAR3O14843 346 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 GPR42O15529 346 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SLC22A3O75751 556 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 HNRNPA1P09651 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
IFT88-201ENST00000319980 OR56A5P0C7T3 313 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 HMOX2P30519 316 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ETV3P41162 512 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CASP2P42575 452 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 RPIAP49247 311 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 AQP4P55087 323 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 KCNK10P57789 538 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ERVK-8P63133 956 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 YBX1P67809 324 aaKnown RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 BOP1Q14137 746 aaKnown RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 ABRAXAS2Q15018 415 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 DHCR24Q15392 516 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 NR6A1Q15406 480 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SAMD4BQ5PRF9 694 aaKnown RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 SULT1C3Q6IMI6 304 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 C8orf82Q6P1X6 216 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 ZFP1Q6P2D0 407 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 RTL10Q7L3V2 364 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 HSD11B1LQ7Z5J1 315 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SFRP1Q8N474 314 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 C12orf76Q8N812 135 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 LEMD2Q8NC56 503 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CCT7Q99832 543 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CD244Q9BZW8 370 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 EBF3Q9H4W6 596 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 AIG1Q9NVV5 245 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ARL15Q9NXU5 204 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 KCTD5Q9NXV2 234 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PKD2L2Q9NZM6 624 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CD300AQ9UGN4 299 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 TMPRSS11EQ9UL52 423 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SLC8A2Q9UPR5 921 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 A0A1W2PP18 115 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 A0A1W2PQ67 120 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 GRXCR1A8MXD5 290 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 WASH3PC4AMC7 463 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CTSLP07711 333 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 VIPR2P41587 438 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 UBE3AQ05086 875 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 TRAF3Q13114 568 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 RCAN2Q14206 197 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CRY1Q16526 586 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 TCEAL5Q5H9L2 206 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ZDHHC20Q5W0Z9 365 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 TMC5Q6UXY8 1006 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 HACD2Q6Y1H2 254 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PDSS2Q86YH6 399 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 LILRA2Q8N149 483 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 DNAJB14Q8TBM8 379 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PHOSPHO2Q8TCD6 241 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 HERVK_113Q902F9 699 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ZNF707Q96C28 371 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 OTUB2Q96DC9 234 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 DCUN1D1Q96GG9 259 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 MRGPRX3Q96LB0 322 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 HOPXQ9BPY8 73 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 TMEM79Q9BSE2 394 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 FAM83DQ9H4H8 585 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PCDH12Q9NPG4 1184 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 FAM8A1Q9UBU6 413 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 XIRP2A4UGR9 3374 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms