RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ADAMTS17Q8TE56 1095 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 TFB1MQ8WVM0 346 aaKnown RBP13.88□□□□□ -0.19
RPP40-201ENST00000319533 OXNAD1Q96HP4 312 aaPredicted RBP13.88□□□□□ -0.19
RPP40-201ENST00000319533 CALR3Q96L12 384 aaKnown RBP13.88□□□□□ -0.19
RPP40-201ENST00000319533 INSM2Q96T92 566 aaPredicted RBP13.88□□□□□ -0.19
RPP40-201ENST00000319533 BAG1Q99933 345 aaPredicted RBP13.88□□□□□ -0.19
RPP40-201ENST00000319533 KCND1Q9NSA2 647 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 HRASLS2Q9NWW9 162 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 PSMD13Q9UNM6 376 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 FARSAQ9Y285 508 aaKnown RBP13.88□□□□□ -0.19
RPP40-201ENST00000319533 BTRCQ9Y297 605 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPP40-201ENST00000319533 HYOU1Q9Y4L1 999 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 NOTCH2Q04721 2471 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 MED13Q9UHV7 2174 aa13.88□□□□□ -0.19
RPP40-201ENST00000319533 UBA6A0AVT1 1052 aaPredicted RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 MGAT4DA6NG13 374 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 GPR39O43194 453 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 VPS4BO75351 444 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 SCRG1O75711 98 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 CEACAM4O75871 244 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 SORBS2O94875 1100 aaKnown RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 ZBTB11O95625 1053 aaPredicted RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 PECAM1P16284 738 aaPredicted RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 HLA-DPA1P20036 260 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 NAP1L1P55209 391 aaKnown RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 RPS18P62269 152 aaKnown RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 PDE1BQ01064 536 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 GPS2Q13227 327 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 IL10RAQ13651 578 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 TFDP2Q14188 446 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 PLCL1Q15111 1095 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 SLC1A5Q15758 541 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 PPP2R5EQ16537 467 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 CPZQ66K79 652 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 C11orf63Q6NUN7 778 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 BEND7Q8N7W2 519 aaPredicted RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 SLC38A9Q8NBW4 561 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 CPT1CQ8TCG5 803 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 LINC00615Q96LM1 132 aaPredicted RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 VAT1Q99536 393 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 SLC25A23Q9BV35 468 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 KIR3DX1Q9H7L2 352 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 LRRC4CQ9HCJ2 640 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 IMP3Q9NV31 184 aaKnown RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 SAE1Q9UBE0 346 aaPredicted RBP13.87□□□□□ -0.19
RPP40-201ENST00000319533 SLC24A2Q9UI40 661 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 ACSL5Q9ULC5 683 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 MAP4K5Q9Y4K4 846 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 PCDHGB7Q9Y5F8 929 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 ALG6Q9Y672 507 aa13.87□□□□□ -0.19
RPP40-201ENST00000319533 TNRC6AQ8NDV7 1962 aaKnown RBP13.86□□□□□ -0.19
RPP40-201ENST00000319533 OR2AG2A6NM03 316 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 TTLL8A6PVC2 850 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 RAB40ALP0C0E4 278 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 GNLYP22749 145 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 UQCRFS1P47985 274 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 ARL4DP49703 201 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 PGDP52209 483 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 KPNA2P52292 529 aaKnown RBP13.86□□□□□ -0.19
RPP40-201ENST00000319533 GSDMDP57764 484 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 MPP3Q13368 585 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 XRCC4Q13426 336 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 LONRF2Q1L5Z9 754 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 BCL7AQ4VC05 210 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 PLEKHS1Q5SXH7 462 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 RAD9BQ6WBX8 426 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 GLT6D1Q7Z4J2 308 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 DAAM2Q86T65 1068 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 KIAA1328Q86T90 577 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 SLC25A41Q8N5S1 370 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 OR2L2Q8NH16 312 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 ZNF398Q8TD17 642 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 WWP1Q9H0M0 922 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 ING2Q9H160 280 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 TFR2Q9UP52 801 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 PKP3Q9Y446 797 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 SHANK1Q9Y566 2161 aa13.86□□□□□ -0.19
RPP40-201ENST00000319533 AGAP14A8MT82 685 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 SGTAO43765 313 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 CST8O60676 142 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 MSL3P1P0C860 447 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 PYGMP11217 842 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 MSH3P20585 1137 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 RORAP35398 523 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 ADCY2Q08462 1091 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 GPR19Q15760 415 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 NADK2Q4G0N4 442 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 C4orf17Q53FE4 359 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 FNBP1LQ5T0N5 605 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 TMTC4Q5T4D3 741 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 FHL5Q5TD97 284 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 HPS6Q86YV9 775 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 TMEM126BQ8IUX1 230 aa13.85□□□□□ -0.19
RPP40-201ENST00000319533 CCDC50Q8IVM0 306 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms