RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PDPRQ8NCN5 879 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 OR13C4Q8NGS5 318 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF420Q8TAQ5 688 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 TRIB2Q92519 343 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SH3YL1Q96HL8 342 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 FCRL2Q96LA5 508 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 C3orf30Q96M34 536 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 KCNC2Q96PR1 638 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 TRNT1Q96Q11 434 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 VPS35Q96QK1 796 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 RBM4BQ9BQ04 359 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 RBM4Q9BWF3 364 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 COLEC11Q9BWP8 271 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SEZ6LQ9BYH1 1024 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 TNKS2Q9H2K2 1166 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ABHD16BQ9H3Z7 469 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CMTM6Q9NX76 183 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ELOVL7A1L3X0 281 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PRR23D1E9PI22 279 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 NPHS1O60500 1241 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 FARP2O94887 1054 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 C1RP00736 705 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PRR23D2P0DMB1 279 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 MBL2P11226 248 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 RFC2P35250 354 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PTPN9P43378 593 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 HSPA7P48741 367 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SEMG2Q02383 582 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 TOP3AQ13472 1001 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 APOFQ13790 326 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CRY1Q16526 586 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 TBRG1Q3YBR2 411 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 DESI1Q6ICB0 168 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ERAP2Q6P179 960 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 GLT6D1Q7Z4J2 308 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 RETREG3Q86VR2 466 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ZDHHC17Q8IUH5 632 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ZDHHC21Q8IVQ6 265 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ELMOD2Q8IZ81 293 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 WDR36Q8NI36 951 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PCNPQ8WW12 178 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ROPN1LQ96C74 230 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 Q96MT0 163 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PRKD2Q9BZL6 878 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 INTS10Q9NVR2 710 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 NKIRAS2Q9NYR9 191 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF624Q9P2J8 865 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ATP6V1HQ9UI12 483 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CRLS1Q9UJA2 301 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 FZD10Q9ULW2 581 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PADI4Q9UM07 663 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 UGT2A1Q9Y4X1 527 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 DOCK2Q92608 1830 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 TYW5A2RUC4 315 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 BBIP1A8MTZ0 92 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 FAM155AB1AL88 458 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CDC7O00311 574 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CXCR6O00574 342 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 GPR182O15218 404 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CD3EAPO15446 510 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 AP2A2O94973 939 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 F9P00740 461 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 OPN1SWP03999 348 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 MYF6P23409 242 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 OR1E1P30953 314 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 RENBPP51606 427 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ALDH6A1Q02252 535 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 COL9A2Q14055 689 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 QPRTQ15274 297 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SMN1Q16637 294 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CYP27C1Q4G0S4 372 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PAQR3Q6TCH7 311 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PLET1Q6UQ28 207 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 ENPP6Q6UWR7 440 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PLEKHG7Q6ZR37 379 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 DEFB128Q7Z7B8 93 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 CFAP52Q8N1V2 620 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 DNERQ8NFT8 737 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 KBTBD8Q8NFY9 601 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 OR6K2Q8NGY2 324 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SELENOMQ8WWX9 145 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 DPF3Q92784 378 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 LPPQ93052 612 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SENP8Q96LD8 212 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 BARD1Q99728 777 aaKnown RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 NANOGQ9H9S0 305 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 DYRK4Q9NR20 520 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PAK1IP1Q9NWT1 392 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-201ENST00000317716 RAPGEFL1Q9UHV5 662 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 PCDHGA8Q9Y5G5 932 aa7.43□□□□□ -1.22
CDHR3-201ENST00000317716 SLC12A8A0AV02 714 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 C2orf81A6NN90 581 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 C5orf58C9J3I9 102 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 M0R129 80 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 MEN1O00255 615 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 DFNA5O60443 496 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 RFPL2O75678 378 aa7.42□□□□□ -1.22
CDHR3-201ENST00000317716 HIST1H2AGP0C0S8 130 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms