RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ZNF806P0C7X5 589 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF182P17025 639 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RPL17P18621 184 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CYP2A7P20853 494 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 LCN1P31025 176 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 LEPRP48357 1165 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CDH13P55290 713 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 YWHAZP63104 245 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 KCNJ11Q14654 390 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 TCEAL5Q5H9L2 206 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 FAM76BQ5HYJ3 339 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 SPESP1Q6UW49 350 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RNF19BQ6ZMZ0 732 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 FAM220AQ7Z4H9 259 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 TSPYL5Q86VY4 417 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 VANGL1Q8TAA9 524 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CYP2W1Q8TAV3 490 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CPT1BQ92523 772 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 HSD17B14Q9BPX1 270 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 HERC2P3Q9BVR0 1158 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF416Q9BWM5 594 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 POMKQ9H5K3 350 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 POLR3BQ9NW08 1133 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CCNL1Q9UK58 526 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 NOD1Q9Y239 953 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RNF6Q9Y252 685 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 PCDHB3Q9Y5E6 796 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 OAS3Q9Y6K5 1087 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 PLXNA2O75051 1894 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 I3L521 148 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 HLA-DPB1P04440 258 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CKMT1AP12532 417 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 MAPK3P27361 379 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 MIPP30301 263 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 AKR1D1P51857 326 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CACNB3P54284 484 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 TLR1Q15399 786 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 PLEKHN1Q494U1 663 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CHADLQ6NUI6 762 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RHBDF2Q6PJF5 856 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 APOBEC3FQ8IUX4 373 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 KBTBD2Q8IY47 623 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 EID2Q8N6I1 236 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 TTLL6Q8N841 843 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 DENND6BQ8NEG7 585 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ASB15Q8WXK1 588 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 UFD1Q92890 307 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RTP4Q96DX8 246 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 SLC29A3Q9BZD2 475 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 SAV1Q9H4B6 383 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 COQ10BQ9H8M1 238 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CMTM6Q9NX76 183 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 SLC17A7Q9P2U7 560 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CNOT6Q9ULM6 557 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 GINS2Q9Y248 185 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 TSPAN4O14817 238 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 PPEF2O14830 753 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CHP2O43745 196 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 EEDO75530 441 aaKnown RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 PGK1P00558 417 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 MSX2P35548 267 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 NSUN2Q08J23 767 aaKnown RBP eCLIP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ZBTB6Q15916 424 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CBWD6Q4V339 395 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RALGPS1Q5JS13 557 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CBWD3Q5JTY5 395 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 NKAPLQ5M9Q1 402 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CBWD5Q5RIA9 395 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RFWD3Q6PCD5 774 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ZFPM1Q8IX07 1006 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 SDR16C5Q8N3Y7 309 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ADAM32Q8TC27 787 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 METTL6Q8TCB7 284 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 DHRS1Q96LJ7 313 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ZDHHC15Q96MV8 337 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 AGAP2Q99490 1192 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CTRCQ99895 268 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 FTHL17Q9BXU8 183 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 RNPEPQ9H4A4 650 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ATP13A3Q9H7F0 1226 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 MEAF6Q9HAF1 191 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 CDHR5Q9HBB8 845 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 UCKL1Q9NWZ5 548 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 NCKAP1Q9Y2A7 1128 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 FARP1Q9Y4F1 1045 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-201ENST00000317147 TNS2Q63HR2 1409 aa4.46□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF879B4DU55 563 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 DFFAO00273 331 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 ADAMTS3O15072 1205 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 MATN4O95460 622 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CHRNGP07510 517 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 OR56A5P0C7T3 313 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TAF6P49848 677 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SRSF11Q05519 484 aaKnown RBP4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SREBF2Q12772 1141 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TGFBIQ15582 683 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 VMACQ2NL98 169 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 SUPT20HL1Q3ZLR7 823 aa4.45□□□□□ -1.7
CNOT1-201ENST00000317147 TYW3Q6IPR3 259 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms