RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 INSL6Q9Y581 213 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 PRSS21Q9Y6M0 314 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 DOCK9Q9BZ29 2069 aa7.71□□□□□ -1.18
CNOT4-201ENST00000315544 KRT19P08727 400 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 IMPDH2P12268 514 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 ITIH1P19827 911 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 GRK5P34947 590 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PBX3P40426 434 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 MAPKAPK2P49137 400 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 CLK3P49761 638 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 SCNN1BP51168 640 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PLK1P53350 603 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 NUBP1P53384 320 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TMBIM6P55061 237 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TMEM62Q0P6H9 643 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 GRIN2CQ14957 1233 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PUS10Q3MIT2 529 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 SYT6Q5T7P8 510 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 RWDD4Q6NW29 188 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 RNF170Q96K19 258 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 RDH12Q96NR8 316 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TRIM8Q9BZR9 551 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 DCAF13Q9NV06 445 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 ACOT9Q9Y305 439 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 MN1Q10571 1320 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 A8MVJ9 347 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 DSCR3O14972 297 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 EPPINO95925 133 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 B3GALT4O96024 378 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 RETP07949 1114 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 FSHRP23945 695 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 BMPR1AP36894 532 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 HSPA13P48723 471 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 NUDT2P50583 147 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 STX1BP61266 288 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 IFITM2Q01629 132 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 ARHGAP22Q7Z5H3 698 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 L3MBTL4Q8NA19 623 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TWIST2Q8WVJ9 160 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 OVCA2Q8WZ82 227 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 VPS33AQ96AX1 596 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 NMD3Q96D46 503 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PABPC5Q96DU9 382 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 CDKN2AIPNLQ96HQ2 116 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PAIP2Q9BPZ3 127 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 SHCBP1LQ9BZQ2 653 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 MAGIXQ9H6Y5 334 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PNPLA3Q9NST1 481 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 GMIPQ9P107 970 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 CPSF2Q9P2I0 782 aaKnown RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 EVLQ9UI08 416 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 KCND3Q9UK17 655 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PCDHGA8Q9Y5G5 932 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 MAGED1Q9Y5V3 778 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 SNX13Q9Y5W8 968 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 CCDC88CQ9P219 2028 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 M0R082 166 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 B4GAT1O43505 415 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 JCHAINP01591 159 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 SRGAP2BP0DMP2 458 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 BRCC3P46736 316 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 HTR6P50406 440 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TEKQ02763 1124 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 CDC20Q12834 499 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 RABL3Q5HYI8 236 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PRSS36Q5K4E3 855 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 ATXN7L2Q5T6C5 722 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 ACBD5Q5T8D3 534 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 RNLSQ5VYX0 342 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TRIM68Q6AZZ1 485 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 CCDC80Q76M96 950 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 WDR53Q7Z5U6 358 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 SPRED2Q7Z698 418 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 MRGPREQ86SM8 312 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 LAS2Q8IYD9 372 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 OR52B6Q8NGF0 335 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 KCNJ9Q92806 393 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 FBXL20Q96IG2 436 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 BCL7BQ9BQE9 202 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 C20orf96Q9NUD7 363 aaPredicted RBP7.7□□□□□ -1.18
CNOT4-201ENST00000315544 TMEM9Q9P0T7 183 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 ERVW-1Q9UQF0 538 aa7.7□□□□□ -1.18
CNOT4-201ENST00000315544 PSMD12O00232 456 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 GPR182O15218 404 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SNAP29O95721 258 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 DDX5P17844 614 aaKnown RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 EFNA1P20827 205 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 CD151P48509 253 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 HMGA2P52926 109 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 UFM1P61960 85 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 ECT2LQ008S8 904 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 NFATC3Q12968 1075 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 TUSC3Q13454 348 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 PDE7AQ13946 482 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 SPIDRQ14159 915 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 RFTN2Q52LD8 501 aaPredicted RBP7.69□□□□□ -1.18
CNOT4-201ENST00000315544 LGSNQ5TDP6 509 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 UBE2UQ5VVX9 321 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 OVOS1Q6IE37 1185 aa7.69□□□□□ -1.18
CNOT4-201ENST00000315544 NEPROQ6NW34 567 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms