RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TPD52P55327 224 aaPredicted RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 TPTEP56180 551 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 LSM3P62310 102 aaKnown RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 FPGSQ05932 587 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 IL10RBQ08334 325 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 PPP1R8Q12972 351 aaKnown RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 TRIM32Q13049 653 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 KCNAB2Q13303 367 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 MAPRE1Q15691 268 aaKnown RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 AGAP7PQ5VUJ5 663 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 LETMD1Q6P1Q0 360 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 Q8N9G6 341 aaPredicted RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 PJA1Q8NG27 643 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 SDCCAG3Q96C92 435 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 FEM1AQ9BSK4 669 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 EHD1Q9H4M9 534 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 HMG20AQ9NP66 347 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 HEBP1Q9NRV9 189 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 ENPP5Q9UJA9 477 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 IGLV3-10A0A075B6K4 115 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 FAM92AA1XBS5 289 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 M0QZQ0 153 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 TBC1D4O60343 1298 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 RAMP2O60895 175 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 CST1P01037 141 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 EPOP01588 193 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 FSHRP23945 695 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 HTR6P50406 440 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 GP2P55259 537 aaKnown RBP13.25□□□□□ -0.29
SKA3-202ENST00000314759 TSPY1Q01534 308 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 SERINC3Q13530 473 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 MAPK11Q15759 364 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 PTPRNQ16849 979 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 CYP20A1Q6UW02 462 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 PRR23BQ6ZRT6 265 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 ZNF555Q8NEP9 628 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 GORASP2Q9H8Y8 452 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 EXD2Q9NVH0 621 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 DNAJB9Q9UBS3 223 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 SPO11Q9Y5K1 396 aa13.25□□□□□ -0.29
SKA3-202ENST00000314759 PTGES3LE9PB15 166 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 ANKRD28O15084 1053 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 DFNA5O60443 496 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 UGT2B11O75310 529 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 PCMT1P22061 227 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NKX2-5P52952 324 aaPredicted RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 GABARAPL2P60520 117 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 PWP1Q13610 501 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 PAGE2BQ5JRK9 111 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 RAP1GAP2Q684P5 730 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 RAVER1Q8IY67 606 aaKnown RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 SIDT2Q8NBJ9 832 aaKnown RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NDNFQ8TB73 568 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 EEF1AKMT1Q8WVE0 214 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 C17orf50Q8WW18 174 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 UGT2B28Q9BY64 529 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NLE1Q9NVX2 485 aaPredicted RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NDUFS3O75489 264 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 TBX18O95935 607 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 CTSHP09668 335 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 BMP4P12644 408 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 ZNF140P52738 457 aaPredicted RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 ISL1P61371 349 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 MRPS6P82932 125 aaKnown RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 INAQ16352 499 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NECAB2Q7Z6G3 386 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 PLEKHH3Q7Z736 793 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 MFSD4AQ8N468 514 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NKAPQ8N5F7 415 aaKnown RBP13.24□□□□□ -0.29
SKA3-202ENST00000314759 OR2T12Q8NG77 320 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 OR4K2Q8NGD2 314 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 SLC10A4Q96EP9 437 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 BTN2A3PQ96KV6 586 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 ZNF382Q96SR6 550 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 C17orf80Q9BSJ5 609 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 CD274Q9NZQ7 290 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 LIMD1Q9UGP4 676 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 ADGRE2Q9UHX3 823 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 CPA4Q9UI42 421 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 RIMKLBQ9ULI2 386 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 NOX1Q9Y5S8 564 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 ACTL7AQ9Y615 435 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 PMF1-BGLAPU3KQ54 211 aa13.24□□□□□ -0.29
SKA3-202ENST00000314759 OR1I1O60431 355 aa13.23□□□□□ -0.29
SKA3-202ENST00000314759 NIPSNAP2O75323 286 aa13.23□□□□□ -0.29
SKA3-202ENST00000314759 CAPN1P07384 714 aa13.23□□□□□ -0.29
SKA3-202ENST00000314759 PRKACGP22612 351 aa13.23□□□□□ -0.29
SKA3-202ENST00000314759 ZNF235Q14590 738 aa13.23□□□□□ -0.29
SKA3-202ENST00000314759 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
SKA3-202ENST00000314759 TMEM236Q5W0B7 351 aa13.23□□□□□ -0.29
SKA3-202ENST00000314759 THOC7Q6I9Y2 204 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms