RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 SYN3O14994 580 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 ECI2O75521 394 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 BMP7P18075 431 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 FKBP1BP68106 108 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 TEAD4Q15561 434 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 TEX47Q8TBZ9 253 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 ZUFSPQ96AP4 578 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 TLE6Q9H808 572 aa13.71□□□□□ -0.22
ZNF541-202ENST00000314121 MAGEB17A8MXT2 336 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 hCG_2039718K7EN88 272 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 K7EPI3 171 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 DUSP11O75319 330 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 HNF4AP41235 474 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ETV4P43268 484 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 YAP1P46937 504 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 RAET1GQ6H3X3 334 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 B3GNT9Q6UX72 402 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 UTS2BQ765I0 119 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ANKRD23Q86SG2 305 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 TMEM135Q86UB9 458 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 PPP1R16AQ96I34 528 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ZNF599Q96NL3 588 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SLITRK2Q9H156 845 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 RPRD1BQ9NQG5 326 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ASF1AQ9Y294 204 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ZFP37Q9Y6Q3 630 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 FFAR2O15552 330 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 DYRK3O43781 588 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 IFNW1P05000 195 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 DHRS4L1P0CG22 281 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ZNF10P21506 573 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 MAPK9P45984 424 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 CCNIQ14094 377 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 FNDC3BQ53EP0 1204 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 GPAT3Q53EU6 434 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 TXNDC5Q8NBS9 432 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 TMBIM1Q969X1 311 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 C12orf43Q96C57 262 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 GULP1Q9UBP9 304 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 COL14A1Q05707 1796 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 A0A1W2PQ67 120 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 AP3D1O14617 1153 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 NIPSNAP2O75323 286 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SNNO75324 88 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ERAL1O75616 437 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 PRKAR1AP10644 381 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ALDH4A1P30038 563 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ZNF829Q3KNS6 432 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SPATS1Q496A3 300 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 PLEKHG4Q58EX7 1191 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 VARS2Q5ST30 1063 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 FAM131AQ6UXB0 335 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SUSD6Q92537 303 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 GMLQ99445 158 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 TCF25Q9BQ70 676 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 A6NHS1 94 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SDHDO14521 159 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 HCRTO43612 131 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 NBNO60934 754 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 XYLBO75191 536 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 STAT5AP42229 794 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 CCT3P49368 545 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ZFP69Q49AA0 526 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SIRPB2Q5JXA9 342 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 GCNT6Q5T4J0 391 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 CHMP1BQ7LBR1 199 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 C16orf62Q7Z3J2 963 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 RAB43Q86YS6 212 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 UPF1Q92900 1129 aaKnown RBP eCLIP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 PCYT2Q99447 389 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 FBRSL1Q9HCM7 1045 aaKnown RBP13.7□□□□□ -0.22
ZNF541-202ENST00000314121 ASAH2Q9NR71 780 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
ZNF541-202ENST00000314121 IRGMA1A4Y4 181 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 SLC28A2O43868 658 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 UGT2B4P06133 528 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 TMPRSS11BQ86T26 416 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 CDH24Q86UP0 819 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 RAVER1Q8IY67 606 aaKnown RBP13.69□□□□□ -0.22
ZNF541-202ENST00000314121 LRRC17Q8N6Y2 441 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 C2CD4AQ8NCU7 369 aaPredicted RBP13.69□□□□□ -0.22
ZNF541-202ENST00000314121 OR52J3Q8NH60 311 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 COL26A1Q96A83 441 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 LIN28AQ9H9Z2 209 aaKnown RBP13.69□□□□□ -0.22
ZNF541-202ENST00000314121 ING3Q9NXR8 418 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 ZNF221Q9UK13 617 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 FAM240BA0A1B0GVZ2 78 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 H0YC42 278 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 MPZL2O60487 215 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 BUD31P41223 144 aaPredicted RBP13.69□□□□□ -0.22
ZNF541-202ENST00000314121 NSG1P42857 185 aa13.69□□□□□ -0.22
ZNF541-202ENST00000314121 STEAP4Q687X5 459 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms