RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 PPM1MQ96MI6 270 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 FCRL4Q96PJ5 515 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 PSMG3-AS1Q96PY0 264 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 FCRL5Q96RD9 977 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 INSM2Q96T92 566 aaPredicted RBP11.89□□□□□ -0.51
TPT1-201ENST00000309246 CD180Q99467 661 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 HRASLS2Q9NWW9 162 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.89□□□□□ -0.515e-31■■■□□ 16.5
TPT1-201ENST00000309246 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
TPT1-201ENST00000309246 ESPL1Q14674 2120 aa11.89□□□□□ -0.51
TPT1-201ENST00000309246 OR6C74A6NCV1 312 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 TTLL8A6PVC2 850 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 STX7O15400 261 aaKnown RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 SCRG1O75711 98 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 EPOP01588 193 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 HLA-DPA1P20036 260 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 MSH3P20585 1137 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 SLC1A1P43005 524 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 PGDP52209 483 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 KPNA2P52292 529 aaKnown RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 TUBB4BP68371 445 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 PDE1BQ01064 536 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 MPP3Q13368 585 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 LAMB3Q13751 1172 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 TUBB2AQ13885 445 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 TAZQ16635 292 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 LONRF2Q1L5Z9 754 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 SYVN1Q86TM6 617 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 BPHLQ86WA6 291 aaPredicted RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 SEC14L1Q92503 715 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 P3H4Q92791 437 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 ZNF501Q96CX3 271 aaPredicted RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 SLC25A23Q9BV35 468 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 TUBB2BQ9BVA1 445 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 FSD1LQ9BXM9 530 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 GPR87Q9BY21 358 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 GOLPH3Q9H4A6 298 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 SMOXQ9NWM0 555 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 SOHLH2Q9NX45 425 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 RSPH14Q9UHP6 348 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 SLC24A2Q9UI40 661 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 FARSAQ9Y285 508 aaKnown RBP11.88□□□□□ -0.51
TPT1-201ENST00000309246 FLNCQ14315 2725 aa11.88□□□□□ -0.51
TPT1-201ENST00000309246 SNRNP200O75643 2136 aaKnown RBP11.87□□□□□ -0.51
TPT1-201ENST00000309246 PCSK5Q92824 1860 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 MGAT4DA6NG13 374 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 PSTPIP1O43586 416 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 MFAP3LO75121 409 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 VPS4BO75351 444 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 PRAMEF1O95521 474 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 ZBTB11O95625 1053 aaPredicted RBP11.87□□□□□ -0.51
TPT1-201ENST00000309246 AGTP01019 485 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 POLBP06746 335 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 SLC35G4P0C7Q5 338 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 GNLYP22749 145 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 PTGIRP43119 386 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 MARCKSL1P49006 195 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 CCL11P51671 97 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 NADK2Q4G0N4 442 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 PRAMEF17Q5VTA0 474 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 HIST2H2BCQ6DN03 193 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 LCN10Q6JVE6 187 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 ARMC6Q6NXE6 501 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 DAAM2Q86T65 1068 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 LILRA3Q8N6C8 439 aaPredicted RBP11.87□□□□□ -0.51
TPT1-201ENST00000309246 SLC38A9Q8NBW4 561 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 CPT1CQ8TCG5 803 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 ZNF398Q8TD17 642 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 THAP4Q8WY91 577 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 QKIQ96PU8 341 aaKnown RBP eCLIP11.87□□□□□ -0.51
TPT1-201ENST00000309246 VAT1Q99536 393 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 FICDQ9BVA6 458 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 TLR10Q9BXR5 811 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 CHST8Q9H2A9 424 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 KIR3DX1Q9H7L2 352 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 C10orf88Q9H8K7 445 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 LRRC4CQ9HCJ2 640 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 ACSS2Q9NR19 701 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 KCND1Q9NSA2 647 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 VPS4AQ9UN37 437 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 ARL5AQ9Y689 179 aa11.87□□□□□ -0.51
TPT1-201ENST00000309246 SEC16AO15027 2179 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 hCG_1818297A0A087WSY0 165 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 SGTAO43765 313 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 LCA5LO95447 670 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 TPM1P09493 284 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 POLR2CP19387 275 aaPredicted RBP11.86□□□□□ -0.51
TPT1-201ENST00000309246 LPOP22079 712 aaPredicted RBP11.86□□□□□ -0.51
TPT1-201ENST00000309246 DEKP35659 375 aaKnown RBP11.86□□□□□ -0.51
TPT1-201ENST00000309246 ABRQ12979 859 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 OLIG2Q13516 323 aa11.86□□□□□ -0.51
TPT1-201ENST00000309246 TFDP3Q5H9I0 405 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms