RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ATP2A3Q93084 1043 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 WBP2Q969T9 261 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 AZIN2Q96A70 460 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ZG16BQ96DA0 208 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ANAPC16Q96DE5 110 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM176AQ96HP8 235 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 OLFM3Q96PB7 478 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 BTBD9Q96Q07 612 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CPXM1Q96SM3 734 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ECSITQ9BQ95 431 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CALN1Q9BXU9 219 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 MTMR12Q9C0I1 747 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 YIPF3Q9GZM5 350 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 NMUR2Q9GZQ4 415 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM9BQ9NQ34 198 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 EIF2B3Q9NR50 452 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 DLL4Q9NR61 685 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ARHGEF4Q9NR80 690 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 FBXO6Q9NRD1 293 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ETNK2Q9NVF9 386 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 THG1LQ9NWX6 298 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 DNAJC28Q9NX36 388 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 DUS2Q9NX74 493 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 NDE1Q9NXR1 346 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 MOCS1Q9NZB8 636 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 RCOR3Q9P2K3 495 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PPARGC1AQ9UBK2 798 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 DCDC2Q9UHG0 476 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CYTH4Q9UIA0 394 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SIX4Q9UIU6 781 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 APOBEC2Q9Y235 224 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TBC1D30Q9Y2I9 924 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 DERAQ9Y315 318 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 C2CD2Q9Y426 696 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 HBS1LQ9Y450 684 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PLXNA2O75051 1894 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 HECTD1Q9ULT8 2610 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 NBPF19A0A087WUL8 3843 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FAM237BA0A1B0GVD1 139 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SMIM31A0A1B0GVY4 71 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FAM221BA6H8Z2 402 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KLHL33A6NCF5 533 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KPNA7A9QM74 516 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA8RI6L899 631 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 GABRDO14764 452 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CASQ2O14958 399 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TRIM24O15164 1050 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 XPOTO43592 962 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 BUD23O43709 281 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 AP1G1O43747 822 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 H2AFYO75367 372 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SKAP2O75563 359 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FBXO21O94952 628 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ZBED1O96006 694 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SERPINE1P05121 402 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CKMP06732 381 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 LYNP07948 512 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PDHA1P08559 390 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CSH1P0DML2 217 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CSH2P0DML3 217 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CD59P13987 128 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TCF3P15923 654 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PDGFRAP16234 1089 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ENGP17813 658 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 IL4RP24394 825 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 LMO2P25791 158 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 DDX6P26196 483 aaKnown RBP eCLIP4.88□□□□□ -1.636e-7■■□□□ 14.3
CKS1B-201ENST00000308987 ADSLP30566 484 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CPOXP36551 454 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 DHPSP49366 369 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PRKAA2P54646 552 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 AQP5P55064 265 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 DYNLT1P63172 113 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TFAMQ00059 246 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ASPHQ12797 758 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SEMA3BQ13214 749 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KCNAB2Q13303 367 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KRT81Q14533 505 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 VEPH1Q14D04 833 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CHI3L2Q15782 390 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PDCD2Q16342 344 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CRY1Q16526 586 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SOWAHAQ2M3V2 549 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FBXO43Q4G163 708 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SOWAHCQ53LP3 525 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TRIM61Q5EBN2 209 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FSCBQ5H9T9 825 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SDCCAG8Q86SQ7 713 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM110Q86TL2 294 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PRPF39Q86UA1 669 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 LCA5Q86VQ0 697 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CTAGE3PQ8IX95 158 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ULK2Q8IYT8 1036 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 NDUFAF2Q8N183 169 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CHCHD4Q8N4Q1 142 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CPA6Q8N4T0 437 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms