RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MEIOBQ8N635 442 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 SHC3Q92529 594 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 ZYG11BQ9C0D3 744 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 UNC93B1Q9H1C4 597 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 KCNK13Q9HB14 408 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 TBC1D13Q9NVG8 400 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 ZNF175Q9Y473 711 aa15.1■□□□□ 0.01
LEMD3-201ENST00000308330 SOCS7O14512 581 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 VEGFBP49765 207 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 LBX1P52954 281 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 FNDC3BQ53EP0 1204 aaKnown RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 PLEKHG4Q58EX7 1191 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 NDUFAF5Q5TEU4 345 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 PGAM4Q8N0Y7 254 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 OR5T2Q8NGG2 359 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ALPK1Q96QP1 1244 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 COMMD9Q9P000 198 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ADAM28Q9UKQ2 775 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 DUSP12Q9UNI6 340 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 PTPRZ1P23471 2315 aaPredicted RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 C10orf71Q711Q0 1435 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ALOX15BO15296 676 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ZDHHC11BP0C7U3 371 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 CSTF1Q05048 431 aaKnown RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 DEF8Q6ZN54 512 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 TOP6BLQ8N6T0 577 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MCOLN3Q8TDD5 553 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 TEKT5Q96M29 485 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 FICDQ9BVA6 458 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MROQ9BYG7 248 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 FGFBP2Q9BYJ0 223 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 OSGEPL1Q9H4B0 414 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 HCN3Q9P1Z3 774 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 PCDHGB4Q9UN71 923 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 U3KQV3 271 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ZNF536O15090 1300 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 C22orf31O95567 290 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 TCF4P15884 667 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 GTF2E2P29084 291 aaKnown RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 DCDC1P59894 354 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 SGCGQ13326 291 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ATAT1Q5SQI0 421 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 DESI1Q6ICB0 168 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 METTL3Q86U44 580 aaKnown RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 FAM35AQ86V20 835 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 LPCAT1Q8NF37 534 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 UTP4Q969X6 686 aaKnown RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 CENPNQ96H22 339 aaPredicted RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MFSD14AQ96MC6 490 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MIPEPQ99797 713 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 BCAS3Q9H6U6 928 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ABCB9Q9NP78 766 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MGAT4BQ9UQ53 548 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ERVK-19Q9WJR5 959 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 AP2S1P53680 142 aaPredicted RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 DDI2Q5TDH0 399 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ZNF773Q6PK81 442 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 SPESP1Q6UW49 350 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MFSD7Q6UXD7 560 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 RD3Q7Z3Z2 195 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 DSG4Q86SJ6 1040 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ADHFE1Q8IWW8 467 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 ANKK1Q8NFD2 765 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 UTP15Q8TED0 518 aaKnown RBP15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MAFIPQ8WZ33 124 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 PKP2Q99959 881 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 MMP27Q9H306 513 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 FAM50BQ9Y247 325 aa15.09■□□□□ 0.01
LEMD3-201ENST00000308330 A8MUA0 341 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 CNPP09543 421 aaKnown RBP15.08■□□□□ 0.01
LEMD3-201ENST00000308330 CKMT2P17540 419 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 GM2AP17900 193 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 CASP3P42574 277 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 RFX4Q33E94 735 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 FUT10Q6P4F1 479 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 LPGAT1Q92604 370 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 GTF2IRD1Q9UHL9 959 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 NDUFAF1Q9Y375 327 aa15.08■□□□□ 0.01
LEMD3-201ENST00000308330 COL1A1P02452 1464 aaPredicted RBP15.08■□□□□ 0.01
LEMD3-201ENST00000308330 H7C0S8 307 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 RBAK-RBAKDNI3L0D1 243 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 GJA1P17302 382 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 SP2Q02086 613 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 DENND1CQ8IV53 801 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 OR2T34Q8NGX1 318 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 OR2T3Q8NH03 318 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 KLHL6Q8WZ60 621 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 KCNS3Q9BQ31 491 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 NEURL2Q9BR09 285 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 MRPL45Q9BRJ2 306 aaKnown RBP15.08■□□□□ 0
LEMD3-201ENST00000308330 CHCHD6Q9BRQ6 235 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 FRMD8P1Q9BZ68 369 aaPredicted RBP15.08■□□□□ 0
LEMD3-201ENST00000308330 RPF2Q9H7B2 306 aaKnown RBP15.08■□□□□ 0
LEMD3-201ENST00000308330 PAK6Q9NQU5 681 aaPredicted RBP15.08■□□□□ 0
LEMD3-201ENST00000308330 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.08■□□□□ 0
LEMD3-201ENST00000308330 POLG2Q9UHN1 485 aa15.08■□□□□ 0
LEMD3-201ENST00000308330 PLEKHA6Q9Y2H5 1048 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms