RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 KLHL35Q6PF15 583 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 CLDN19Q8N6F1 224 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 HM13Q8TCT9 377 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 EXTL1Q92935 676 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 OR6C1Q96RD1 312 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 ARHGAP9Q9BRR9 750 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZNF768Q9H5H4 540 aaKnown RBP16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 SIDT1Q9NXL6 827 aaKnown RBP16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 SMARCAL1Q9NZC9 954 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 APRTP07741 180 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 ZSCAN5DPP0CG00 497 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 ARCN1P48444 511 aaKnown RBP16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 DBN1Q16643 649 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 SKIDA1Q1XH10 827 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 DNTTIP2Q5QJE6 756 aaKnown RBP16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 RASGRP3Q8IV61 690 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 PIANPQ8IYJ0 282 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 UNC5BQ8IZJ1 945 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 NLGN4XQ8N0W4 816 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 GLIS1Q8NBF1 620 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 NLGN4YQ8NFZ3 816 aaPredicted RBP16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 LINC00615Q96LM1 132 aaPredicted RBP16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 ZPBPQ9BS86 351 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 SEMA4CQ9C0C4 833 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 VPS37BQ9H9H4 285 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 HRASLS2Q9NWW9 162 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 PILRAQ9UKJ1 303 aa16.64■□□□□ 0.25
HMGCLL1-202ENST00000308161 PIEZO2Q9H5I5 2752 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 CCDC162PA2VCL2 907 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 KLHL33A6NCF5 533 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 OR6C74A6NCV1 312 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 ERI2A8K979 691 aaKnown RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 H7C0S8 307 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 TOX3O15405 576 aaPredicted RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 FGGP02679 453 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 CXCR5P32302 372 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 ARL4DP49703 201 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 CCZ1BP86790 482 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 CCZ1P86791 482 aaPredicted RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 ARMC6Q6NXE6 501 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 XKR5Q6UX68 686 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 GSTA5Q7RTV2 222 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 TIPARPQ7Z3E1 657 aaKnown RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 PRSS42Q7Z5A4 293 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 OOSP2Q86WS3 158 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 ZNF843Q8N446 348 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 KIAA1143Q96AT1 154 aaPredicted RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 FERD3LQ96RJ6 166 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 C19orf43Q9BQ61 176 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 CCM2Q9BSQ5 444 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 ULBP3Q9BZM4 244 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 COG4Q9H9E3 785 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 GPN2Q9H9Y4 310 aaPredicted RBP16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 PAK5Q9P286 719 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 SLC24A2Q9UI40 661 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 COLEC10Q9Y6Z7 277 aa16.63■□□□□ 0.25
HMGCLL1-202ENST00000308161 IGLV3-16A0A075B6K0 115 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 IGHV5-51A0A0C4DH38 117 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 TRBV5-4A0A0C4DH59 114 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 UBA6A0AVT1 1052 aaPredicted RBP16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 HEATR9A2RTY3 570 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 OR5K3A6NET4 321 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 MROH6A6NGR9 719 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 CEP104O60308 925 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 PREPP48147 710 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 SEMA5AQ13591 1074 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 KCNAB1Q14722 419 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 SIX1Q15475 284 aaPredicted RBP16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 ZNF449Q6P9G9 518 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 SIDT2Q8NBJ9 832 aaKnown RBP16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 TRIM58Q8NG06 486 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 HDAC10Q969S8 669 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 WBP1Q96G27 269 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 MAP3K3Q99759 626 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 EPHA6Q9UF33 1036 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 SLC2A6Q9UGQ3 507 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 LNPEPQ9UIQ6 1025 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 PPP2R2CQ9Y2T4 447 aa16.62■□□□□ 0.25
HMGCLL1-202ENST00000308161 LOC101059948A0A1B0GTJ6 334 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 IFRD1O00458 451 aaPredicted RBP16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 KIAA0754O94854 1291 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 SUN1O94901 812 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 ZNF28P17035 718 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 MAP4P27816 1152 aaKnown RBP16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 PDHA2P29803 388 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 RPL22P35268 128 aaKnown RBP16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 TERF1P54274 439 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 BRD3Q15059 726 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 CCNG2Q16589 344 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 CAPRIN2Q6IMN6 1127 aaKnown RBP16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 ZNF662Q6ZS27 426 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 OR4E2Q8NGC2 313 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 OR6P1Q8NGX9 317 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 KLHL6Q8WZ60 621 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 UBXN4Q92575 508 aa16.61■□□□□ 0.25
HMGCLL1-202ENST00000308161 TLR10Q9BXR5 811 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms