RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SEMG2Q02383 582 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 PPP1R8Q12972 351 aaKnown RBP14.9□□□□□ -0.02
CSDC2-201ENST00000306149 CXorf57Q6NSI4 855 aaKnown RBP14.9□□□□□ -0.02
CSDC2-201ENST00000306149 DUS1LQ6P1R4 473 aaKnown RBP14.9□□□□□ -0.02
CSDC2-201ENST00000306149 ELMSAN1Q6PJG2 1045 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 CARNMT1Q8N4J0 409 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 FBXO22Q8NEZ5 403 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 LKAAEAR1Q8TD35 194 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 ABTB1Q969K4 478 aaPredicted RBP14.9□□□□□ -0.02
CSDC2-201ENST00000306149 ISG20Q96AZ6 181 aaKnown RBP14.9□□□□□ -0.02
CSDC2-201ENST00000306149 CIPCQ9C0C6 399 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 POLR1BQ9H9Y6 1135 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 NTN4Q9HB63 628 aa14.9□□□□□ -0.02
CSDC2-201ENST00000306149 MAGEB3O15480 346 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 TBC1D4O60343 1298 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 ATE1O95260 518 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 SLC2A4P14672 509 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 ELK4P28324 431 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 HTR1EP28566 365 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 HMOX2P30519 316 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 GKP32189 559 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 GTF2H2Q13888 395 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 HECTD3Q5T447 861 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 GTF2H2CQ6P1K8 395 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 SBSNQ6UWP8 590 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 Q6ZNX1 250 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 RNF180Q86T96 592 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 PNPT1Q8TCS8 783 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 MUS81Q96NY9 551 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 FAIMQ9NVQ4 179 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 VPS9D1Q9Y2B5 631 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 SLC30A1Q9Y6M5 507 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 NUP214P35658 2090 aaPredicted RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 H0Y626 953 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 LSM1O15116 133 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 DFNA5O60443 496 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 TRIM16O95361 564 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 RPL38P63173 70 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 ADARB1P78563 741 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 HMGCS1Q01581 520 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 PTRHD1Q6GMV3 140 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 ZNF554Q86TJ5 538 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 ITIH5Q86UX2 942 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 PAF1Q8N7H5 531 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 SMYD1Q8NB12 490 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 CNDP2Q96KP4 475 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 TUBA1CQ9BQE3 449 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 TTPALQ9BTX7 342 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 CARS2Q9HA77 564 aaKnown RBP14.89□□□□□ -0.03
CSDC2-201ENST00000306149 ZFP14Q9HCL3 533 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 TMEM45AQ9NWC5 275 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 VAPAQ9P0L0 249 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 IL17CQ9P0M4 197 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 UTS2RQ9UKP6 389 aa14.89□□□□□ -0.03
CSDC2-201ENST00000306149 H0YAE9 185 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PFDN6O15212 129 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 CA12O43570 354 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 ESR1P03372 595 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 GALTP07902 379 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 SLC10A3P09131 477 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 UGT1A1P22309 533 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 UGT1A4P22310 534 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 UGT1A3P35503 534 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 UGT1A5P35504 534 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PTGER3P43115 390 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 HLCSP50747 726 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 ANKRD34AQ69YU3 496 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 TMEM26Q6ZUK4 368 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 KCTD8Q6ZWB6 473 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 MILR1Q7Z6M3 343 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PROSER1Q86XN7 944 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 LEMD2Q8NC56 503 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 FIG4Q92562 907 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 CGREF1Q99674 301 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 P2RY12Q9H244 342 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 ELOVL2Q9NXB9 296 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PKD2L2Q9NZM6 624 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 TMEM9Q9P0T7 183 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PKP3Q9Y446 797 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PRSS21Q9Y6M0 314 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PIKFYVEQ9Y2I7 2098 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PRRC2BQ5JSZ5 2229 aaKnown RBP14.88□□□□□ -0.03
CSDC2-201ENST00000306149 A0A1B0GVM2 712 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 H0Y858 1186 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 PRMT5O14744 637 aaPredicted RBP14.88□□□□□ -0.03
CSDC2-201ENST00000306149 FFAR2O15552 330 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 NBNO60934 754 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 CPNE6O95741 557 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 NPPAP01160 153 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 CST5P28325 142 aaPredicted RBP14.88□□□□□ -0.03
CSDC2-201ENST00000306149 POLR2IP36954 125 aaKnown RBP14.88□□□□□ -0.03
CSDC2-201ENST00000306149 CLCN4P51793 760 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 LAPTM5Q13571 262 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 C16orf72Q14CZ0 275 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 TCTN1Q2MV58 587 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 CCNYL2Q5T2Q4 361 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 ACBD5Q5T8D3 534 aaPredicted RBP14.88□□□□□ -0.03
CSDC2-201ENST00000306149 NCEH1Q6PIU2 408 aa14.88□□□□□ -0.03
CSDC2-201ENST00000306149 STK32CQ86UX6 486 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms