RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SMPDL3AQ92484 453 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 SLC22A12Q96S37 553 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 NDC1Q9BTX1 674 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 TDRD1Q9BXT4 1180 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 AK5Q9Y6K8 562 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 PRAMEF26H0Y7S4 382 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 LINC01565O15544 149 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 AP2A2O94973 939 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CCND1P24385 295 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CD6P30203 668 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CTHP32929 405 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 PNLIPRP1P54315 467 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 FRG1Q14331 258 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 PDK4Q16654 411 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 LSM12Q3MHD2 195 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 FAM182AQ5T1J6 154 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 NCEH1Q6PIU2 408 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 Q7L0L9 218 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 KRT73Q86Y46 540 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 PIWIL2Q8TC59 973 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 BCL7CQ8WUZ0 217 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 PPCDCQ96CD2 204 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CNDP1Q96KN2 507 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 ROGDIQ9GZN7 287 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CAAP1Q9H8G2 361 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 ANKHQ9HCJ1 492 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF490Q9ULM2 529 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 WDR90Q96KV7 1748 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 YKT6O15498 198 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 H2AFXP16104 143 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 PTGIRP43119 386 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 C16orf62Q7Z3J2 963 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 CDK20Q8IZL9 346 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 RBM18Q96H35 190 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 NOL11Q9H8H0 719 aaKnown RBP9.12□□□□□ -0.95
PTPRE-202ENST00000306042 SERTAD3Q9UJW9 196 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 ZNF232Q9UNY5 417 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 RAP2CQ9Y3L5 183 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 NRXN2Q9P2S2 1712 aa9.12□□□□□ -0.95
PTPRE-202ENST00000306042 VEGFDO43915 354 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ERN1O75460 977 aaKnown RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 IRAK1P51617 712 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 HTRA4P83105 476 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TRAF2Q12933 501 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 OASLQ15646 514 aaKnown RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 DCAF12L1Q5VU92 463 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 FAM109BQ6ICB4 259 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CENPIQ92674 756 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ZDHHC12Q96GR4 267 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CDX2Q99626 313 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 PIF1Q9H611 641 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 C3orf14Q9HBI5 128 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ANLNQ9NQW6 1124 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 NLE1Q9NVX2 485 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MRTO4Q9UKD2 239 aaKnown RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 FAM221BA6H8Z2 402 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 WASH3PC4AMC7 463 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 MUSKO15146 869 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 SDC3O75056 442 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 LINC00032P0C843 101 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 RRM2P31350 389 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 AP1S2P56377 157 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TCEAL1Q15170 157 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 LRRC23Q53EV4 343 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 FBXO48Q5FWF7 155 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 PAQR3Q6TCH7 311 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TSACCQ96A04 125 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 OSBPL7Q9BZF2 842 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 SLC2A6Q9UGQ3 507 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TRIOBPQ9H2D6 2365 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 A0A0J9YVX5 310 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CAPN8A6NHC0 703 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TMEM150CB9EJG8 249 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 SRFP11831 508 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 ITGB7P26010 798 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CCR8P51685 355 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TAS2R50P59544 299 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 CHRNB3Q05901 458 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 GTF2H2Q13888 395 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 FLOT2Q14254 428 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 HSF5Q4G112 596 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 RAB6CQ53S08 254 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 PPM1JQ5JR12 505 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 PRAMEF14Q5SWL7 426 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 PRAMEF13Q5VWM6 474 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 GTF2H2CQ6P1K8 395 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TRMT10BQ6PF06 316 aaKnown RBP9.11□□□□□ -0.95
PTPRE-202ENST00000306042 GPR180Q86V85 440 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 C10orf107Q8IVU9 208 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 DCUN1D3Q8IWE4 304 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 NAT8LQ8N9F0 302 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 TTLQ8NG68 377 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 IER2Q9BTL4 223 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 SLC25A23Q9BV35 468 aa9.11□□□□□ -0.95
PTPRE-202ENST00000306042 BRINP2Q9C0B6 783 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms