RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CFLARO15519 480 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 HRO43593 1189 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SSX4O60224 188 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 DPM1O60762 260 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PRAMEF11O60813 436 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PAGE1O75459 146 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ATP6AP2O75787 350 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SEMA3DO95025 777 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PRLP01236 227 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 OCM2P0CE71 109 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 OCMP0CE72 109 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 CCNA2P20248 432 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 EPHA2P29317 976 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CD40LGP29965 261 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CCR1P32246 355 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PBX3P40426 434 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 LIPEQ05469 1076 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CDK5R2Q13319 367 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 DAG1Q14118 895 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 USP10Q14694 798 aaKnown RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 TRIP4Q15650 581 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 CDKL4Q5MAI5 379 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TBCELQ5QJ74 424 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 LRIF1Q5T3J3 769 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 GPR158Q5T848 1215 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 VASH1Q7L8A9 365 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 SPATA19Q7Z5L4 167 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 MON1AQ86VX9 555 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 MINDY2Q8NBR6 621 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TAMM41Q96BW9 452 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 EID2BQ96D98 161 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 RNF31Q96EP0 1072 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ASPSCR1Q9BZE9 553 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PAIP1Q9H074 479 aaKnown RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS50-202ENST00000305866 OLA1Q9NTK5 396 aaKnown RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 NLE1Q9NVX2 485 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 CACNG4Q9UBN1 327 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 MICAL3Q7RTP6 2002 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CCL15-CCL14A0A0B4J2E2 113 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 A0A0G2JMP0 313 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 H3BQ06 376 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 USP17L7P0C7H9 530 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 HLA-DPA1P20036 260 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 EFNA1P20827 205 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 CDH3P22223 829 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 UGT2B10P36537 528 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ITGA1P56199 1179 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 FPGSQ05932 587 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PLCL1Q15111 1095 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CCL15Q16663 113 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CARD16Q5EG05 197 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 AGAP9Q5VTM2 703 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 FAHD1Q6P587 224 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TBC1D21Q8IYX1 336 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SLC7A5P1Q8MH63 180 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 CLYBLQ8N0X4 340 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 RHOXF1Q8NHV9 184 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 GTF2H4Q92759 462 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS50-202ENST00000305866 KIAA1191Q96A73 305 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 VPS33AQ96AX1 596 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 SLC10A4Q96EP9 437 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 RAD9AQ99638 391 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TAPBPLQ9BX59 468 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 NECTIN3Q9NQS3 549 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 VAPAQ9P0L0 249 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 TBC1D24Q9ULP9 559 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ST3GAL5Q9UNP4 418 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 ARIH1Q9Y4X5 557 aaPredicted RBP5.37□□□□□ -1.55
VPS50-202ENST00000305866 TRIM17Q9Y577 477 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 PCDHGA3Q9Y5H0 932 aa5.37□□□□□ -1.55
VPS50-202ENST00000305866 KCNE1BA0A087WTH5 132 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 OR51F1A6NGY5 319 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 METTL15A6NJ78 407 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 AGAP14A8MT82 685 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 SCN2BO60939 215 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 TRPA1O75762 1119 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 SRP72O76094 671 aaKnown RBP5.36□□□□□ -1.55
VPS50-202ENST00000305866 KLHL18O94889 574 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 OR4F21O95013 312 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 CD160O95971 181 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 TSPAN8P19075 237 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 JAK1P23458 1154 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 LIMS1P48059 325 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 RENBPP51606 427 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 TMED1Q13445 227 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 NR1D2Q14995 579 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 ACOX1Q15067 660 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 FSCN1Q16658 493 aaKnown RBP5.36□□□□□ -1.55
VPS50-202ENST00000305866 MEP1AQ16819 746 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 FLYWCH1Q4VC44 716 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 SLC44A4Q53GD3 710 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 MS4A13Q5J8X5 152 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 SIRPB2Q5JXA9 342 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 OR4F3Q6IEY1 312 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 ATCAYQ86WG3 371 aa5.36□□□□□ -1.55
VPS50-202ENST00000305866 DCP2Q8IU60 420 aaKnown RBP5.36□□□□□ -1.55
VPS50-202ENST00000305866 PIAS4Q8N2W9 510 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms