RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RPL22P35268 128 aaKnown RBP25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 LEPRP48357 1165 aaKnown RBP25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 GSE1Q14687 1217 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 ZNF449Q6P9G9 518 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 NLRP9Q7RTR0 991 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 PRSS42Q7Z5A4 293 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 PIANPQ8IYJ0 282 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 EIF2B3Q9NR50 452 aaKnown RBP25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 CACNA1GO43497 2377 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 QSOX1O00391 747 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 POLR1CO15160 346 aaPredicted RBP25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 PRSS56P0CW18 603 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 GRIA1P42261 906 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 NSG1P42857 185 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 KRT33BQ14525 404 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 ITIH4Q14624 930 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 DBN1Q16643 649 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 TSTD2Q5T7W7 516 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 LYPLAL1Q5VWZ2 237 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 CAPRIN2Q6IMN6 1127 aaKnown RBP25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 IRGCQ6NXR0 463 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 XKR5Q6UX68 686 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 SPDYE1Q8NFV5 336 aaPredicted RBP25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 TTC1Q99614 292 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 SMARCAL1Q9NZC9 954 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 JRKLQ9Y4A0 524 aa25.83■■□□□ 1.73
CDKN2A-201ENST00000304494 SMG1Q96Q15 3661 aaKnown RBP25.83■■□□□ 1.72
CDKN2A-201ENST00000304494 AP3B1O00203 1094 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 EFSO43281 561 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 NDUFS1P28331 727 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 CACHD1Q5VU97 1274 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 AFTPHQ6ULP2 937 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 ZSCAN1Q8NBB4 408 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 PPHLN1Q8NEY8 458 aaKnown RBP25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 OR13J1Q8NGT2 312 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 PEX13Q92968 403 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 NKD1Q969G9 470 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 CTRCQ99895 268 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 KIR3DX1Q9H7L2 352 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 COG4Q9H9E3 785 aa25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 SIDT1Q9NXL6 827 aaKnown RBP25.82■■□□□ 1.72
CDKN2A-201ENST00000304494 CCDC162PA2VCL2 907 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 GOLGA6L3A6NEY3 463 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 FOXN2P32314 431 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 SEPHS1P49903 392 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 BASP1P80723 227 aaKnown RBP25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 RPA4Q13156 261 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 DUS1LQ6P1R4 473 aaKnown RBP25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 CYB5D1Q6P9G0 228 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 PACS1Q6VY07 963 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 FAM92BQ6ZTR7 304 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 VASH2Q86V25 355 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 LILRA3Q8N6C8 439 aaPredicted RBP25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 CLDN19Q8N6F1 224 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 IL22RA1Q8N6P7 574 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 SLC39A7Q92504 469 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 WBP1Q96G27 269 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 RMDN2Q96LZ7 410 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 SLC24A2Q9UI40 661 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 TCAF1Q9Y4C2 921 aa25.81■■□□□ 1.72
CDKN2A-201ENST00000304494 OR51F1A6NGY5 319 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 IFRD1O00458 451 aaPredicted RBP25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 ACVR1Q04771 509 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 FOXM1Q08050 763 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 TAF1BQ53T94 588 aaPredicted RBP25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 CERS6Q6ZMG9 384 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 OOSP2Q86WS3 158 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 CACNA2D3Q8IZS8 1091 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 JPH3Q8WXH2 748 aaPredicted RBP25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 KLHL6Q8WZ60 621 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 UBXN4Q92575 508 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 HDAC10Q969S8 669 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 APMAPQ9HDC9 416 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 PILRAQ9UKJ1 303 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 MGAQ8IWI9 3026 aa25.8■■□□□ 1.72
CDKN2A-201ENST00000304494 OR5K3A6NET4 321 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 F8W8V4 182 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 KIF1CO43896 1103 aaKnown RBP25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 RAD1O60671 282 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 GOT2P00505 430 aaKnown RBP25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 FTH1P02794 183 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 KCNJ1P48048 391 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 CD151P48509 253 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 PRAMEP78395 509 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 SRSF6Q13247 344 aaKnown RBP25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 IL11RAQ14626 422 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 ZNF658BQ4V348 819 aaPredicted RBP25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 MICALCLQ6ZW33 695 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 SGSM3Q96HU1 749 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 PBKQ96KB5 322 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 CD180Q99467 661 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 HRASLS2Q9NWW9 162 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 SLC2A6Q9UGQ3 507 aa25.79■■□□□ 1.72
CDKN2A-201ENST00000304494 PPARGP37231 505 aaPredicted RBP25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 PCID2Q5JVF3 399 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 ARMC6Q6NXE6 501 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 NLGN4XQ8N0W4 816 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 PRELID2Q8N945 189 aa25.78■■□□□ 1.72
CDKN2A-201ENST00000304494 ACVR1CQ8NER5 493 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms