RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 ZNF558Q96NG5 402 aa12.68□□□□□ -0.38
VAT1L-201ENST00000302536 MRPL9Q9BYD2 267 aaKnown RBP12.68□□□□□ -0.38
VAT1L-201ENST00000302536 POLR1EQ9GZS1 481 aaKnown RBP12.68□□□□□ -0.38
VAT1L-201ENST00000302536 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
VAT1L-201ENST00000302536 YIPF1Q9Y548 306 aa12.68□□□□□ -0.38
VAT1L-201ENST00000302536 PRDX6P30041 224 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 IDH2P48735 452 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CDKN1CP49918 316 aaPredicted RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 VBP1P61758 197 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 PHKG1Q16816 387 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 DENND5AQ6IQ26 1287 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 LYSMD3Q7Z3D4 306 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 C8orf59Q8N0T1 100 aaPredicted RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 OR4K2Q8NGD2 314 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SLC22A17Q8WUG5 538 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 UBA2Q9UBT2 640 aaPredicted RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 GNPTGQ9UJJ9 305 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 PCDHB9Q9Y5E1 797 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 NUP214P35658 2090 aaPredicted RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 TDRD15B5MCY1 1934 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 PRORSD1PA6NEY8 169 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SYNCRIPO60506 623 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CTBSQ01459 385 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SMU1Q2TAY7 513 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 STEAP4Q687X5 459 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CUZD1Q86UP6 607 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CHERPQ8IWX8 916 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 OR2T34Q8NGX1 318 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 OR2T3Q8NH03 318 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 HEXDCQ8WVB3 486 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 ULK4Q96C45 1275 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 MAELQ96JY0 434 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 TSEN34Q9BSV6 310 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 BDH2Q9BUT1 245 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 ZFP14Q9HCL3 533 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CD274Q9NZQ7 290 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CPQQ9Y646 472 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 A0A1W2PRU2 124 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 XPNPEP2O43895 674 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 FAM20BO75063 409 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 GSNP06396 782 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 DDX5P17844 614 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 CDK18Q07002 472 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 DDX39BQ13838 428 aaKnown RBP12.67□□□□□ -0.38
VAT1L-201ENST00000302536 LRP8Q14114 963 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 NR6A1Q15406 480 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 MEP1AQ16819 746 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 ARMC4Q5T2S8 1044 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 AGAP9Q5VTM2 703 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SLC39A5Q6ZMH5 540 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 MFSD6LQ8IWD5 586 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 OTULINQ96BN8 352 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 IL12RB2Q99665 862 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 ASPSCR1Q9BZE9 553 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SLC25A51Q9H1U9 297 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 RHOJQ9H4E5 214 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
VAT1L-201ENST00000302536 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 LRRC14BA6NHZ5 514 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 E5RI56 91 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 CCL16O15467 120 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 IGLV3-25P01717 112 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 MYCLP1P12525 358 aaPredicted RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ZNF26P17031 533 aaPredicted RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 FMO3P31513 532 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 GRK3P35626 688 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 FRG1Q14331 258 aaKnown RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 BORAQ6PGQ7 559 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 PTGR2Q8N8N7 351 aaPredicted RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 HDAC2Q92769 488 aaKnown RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 VN1R3Q9BXE9 311 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 SMURF2Q9HAU4 748 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 VPS4AQ9UN37 437 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ASCC3Q8N3C0 2202 aaKnown RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ZNF840PA6NDX5 716 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 IQCF5A8MTL0 148 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ALDH1A2O94788 518 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 SEMA3DO95025 777 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ITGB8P26012 769 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 GTF2E2P29084 291 aaKnown RBP12.66□□□□□ -0.38
VAT1L-201ENST00000302536 HPCAL1P37235 193 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 MTPNP58546 118 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 RHOAP61586 193 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 GLT6D1Q7Z4J2 308 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ZNF540Q8NDQ6 660 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 ZHX1-C8orf76Q96EF9 292 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 OLFM1Q99784 485 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 SCN3BQ9NY72 215 aa12.66□□□□□ -0.38
VAT1L-201ENST00000302536 FBXO9Q9UK97 447 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms