RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 KCNK6Q9Y257 313 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 GPSM3Q9Y4H4 160 aa9.31□□□□□ -0.92
RFX3-201ENST00000302303 ADAMTS9Q9P2N4 1935 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 TP53BP1Q12888 1972 aaPredicted RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 A0A1B0GTQ1 180 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 ARHGAP33O14559 1287 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 CDX4O14627 284 aaPredicted RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 PIAS2O75928 621 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 KRT38O76015 456 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 FTH1P02794 183 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 ZNF806P0C7X5 589 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 ZNF37AP17032 561 aaPredicted RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 SAT1P21673 171 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 DGKAP23743 735 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 PBLDP30039 288 aaPredicted RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 SKIV2L2P42285 1042 aaKnown RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 DPP6P42658 865 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 PREPP48147 710 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 KCNC1P48547 511 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 C21orf59P57076 290 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 SLC18A2Q05940 514 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 IFFO1Q0D2I5 559 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 GTF2H3Q13889 308 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 CLCA4Q14CN2 919 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 TMED2Q15363 201 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 TCEA2Q15560 299 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 TEAD4Q15561 434 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 KRT71Q3SY84 523 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 PRRT3Q5FWE3 981 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 PLEKHS1Q5SXH7 462 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 CAPRIN2Q6IMN6 1127 aaKnown RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 ABRAXAS1Q6UWZ7 409 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 DBX2Q6ZNG2 339 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 CDHR3Q6ZTQ4 885 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 EXOC3L1Q86VI1 746 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 CPNE9Q8IYJ1 553 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 CFAP206Q8IYR0 622 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 SPATA6LQ8N4H0 392 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 HM13Q8TCT9 377 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 ELMO1Q92556 727 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 INPP5DQ92835 1189 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 MTBPQ96DY7 904 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 PGM2Q96G03 612 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 PDLIM5Q96HC4 596 aaKnown RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 PANX3Q96QZ0 392 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 POPDC3Q9HBV1 291 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 SARS2Q9NP81 518 aaKnown RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 IGSF5Q9NSI5 407 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 KLC4Q9NSK0 619 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 ZNF358Q9NW07 568 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 APOBEC3BQ9UH17 382 aaKnown RBP9.3□□□□□ -0.92
RFX3-201ENST00000302303 RAPGEFL1Q9UHV5 662 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 DNAJC16Q9Y2G8 782 aa9.3□□□□□ -0.92
RFX3-201ENST00000302303 OTOGLQ3ZCN5 2332 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 PRAMEF33A0A0G2JMD5 474 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 IQANK1A0A1B0GTG1 560 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 LNP1A1A4G5 178 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 LIN7AO14910 233 aaPredicted RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 YY2O15391 372 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 KCNJ13O60928 360 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 SDC3O75056 442 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 VPS26AO75436 327 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 KRT37O76014 449 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 MATN4O95460 622 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 CFIP05156 583 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 GSTM1P09488 218 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 SBK3P0C264 359 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 TPBGLP0DKB5 382 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 STMN1P16949 149 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 ENGP17813 658 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 CCNFP41002 786 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 GSTM4Q03013 218 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 HSPA14Q0VDF9 509 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 ILF2Q12905 390 aaKnown RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 LRP8Q14114 963 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 SF3A2Q15428 464 aaKnown RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 WASH2PQ6VEQ5 465 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 C17orf82Q86X59 251 aaPredicted RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 SLC22A15Q8IZD6 547 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 ZBTB2Q8N680 514 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 ZNF548Q8NEK5 533 aaPredicted RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 SAP25Q8TEE9 199 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 TLCD1Q96CP7 247 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 ZDHHC5Q9C0B5 715 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 WASH6PQ9NQA3 447 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 PRDM8Q9NQV8 689 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 ZNF624Q9P2J8 865 aaPredicted RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 FAM8A1Q9UBU6 413 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 RUVBL2Q9Y230 463 aaKnown RBP9.29□□□□□ -0.92
RFX3-201ENST00000302303 IKBKGQ9Y6K9 419 aa9.29□□□□□ -0.92
RFX3-201ENST00000302303 A0A096LPK6 155 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 KLHL33A6NCF5 533 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 TARM1B6A8C7 271 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 E5RI56 91 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 GFYI3L273 518 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 GOLGA8RI6L899 631 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 AQP9O43315 295 aa9.28□□□□□ -0.92
RFX3-201ENST00000302303 LMNAP02545 664 aaKnown RBP9.28□□□□□ -0.92
RFX3-201ENST00000302303 RPL10P27635 214 aaKnown RBP9.28□□□□□ -0.92
RFX3-201ENST00000302303 EPHA8P29322 1005 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms