RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TAB1Q15750 504 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 ZBED5Q49AG3 693 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 PSAPL1Q6NUJ1 521 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 GATAD2AQ86YP4 633 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 GTPBP3Q969Y2 492 aaKnown RBP13.12□□□□□ -0.31
CASC4-201ENST00000299957 COX4I2Q96KJ9 171 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 PLAC1Q9HBJ0 212 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 SERPINI2O75830 405 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 PGFP49763 221 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 DEFA1P59665 94 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 DEFA3P59666 94 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 VBP1P61758 197 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 SYVN1Q86TM6 617 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 ZDHHC21Q8IVQ6 265 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 METTL25Q8N6Q8 603 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 ARL14EPQ8N8R7 260 aaPredicted RBP13.11□□□□□ -0.31
CASC4-201ENST00000299957 DBF4BQ8NFT6 615 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 TAMM41Q96BW9 452 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 NSMCE3Q96MG7 304 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 HAPLN3Q96S86 360 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 OSBPL2Q9H1P3 480 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 GIMAP4Q9NUV9 329 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 A0A0J9YVX5 310 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 H3BNH8 94 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
CASC4-201ENST00000299957 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 CDK4P11802 303 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 TTKP33981 857 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 SPANXN2Q5MJ10 180 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 ADGRG6Q86SQ4 1221 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 ZNF605Q86T29 641 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 SLC2A13Q96QE2 648 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 COPS8Q99627 209 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 A0A1W2PP18 115 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 TUBB3Q13509 450 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 NAE1Q13564 534 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 TMEM236Q5W0B7 351 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 FAM180BQ6P0A1 224 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 ELMOD1Q8N336 334 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 CMTM6Q9NX76 183 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 ACTR3BQ9P1U1 418 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 RIMS3Q9UJD0 308 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 RNF11Q9Y3C5 154 aa13.11□□□□□ -0.31
CASC4-201ENST00000299957 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 LRG1P02750 347 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 CDK9P50750 372 aaKnown RBP13.1□□□□□ -0.31
CASC4-201ENST00000299957 DAG1Q14118 895 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 OR4F3Q6IEY1 312 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 PTCD2Q8WV60 388 aaKnown RBP13.1□□□□□ -0.31
CASC4-201ENST00000299957 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 MFSD1Q9H3U5 465 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 FBP2O00757 339 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 ACSL4O60488 711 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 CCDC159P0C7I6 412 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
CASC4-201ENST00000299957 MAP2K4P45985 399 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 ERVK-8P63133 956 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 SPIBQ01892 262 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 HERC3Q15034 1050 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
CASC4-201ENST00000299957 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
CASC4-201ENST00000299957 FAR1Q8WVX9 515 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 AARSD1Q9BTE6 412 aaKnown RBP13.1□□□□□ -0.31
CASC4-201ENST00000299957 TRIM39Q9HCM9 518 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 TMCC3Q9ULS5 477 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 MAP4K5Q9Y4K4 846 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 A0A0G2JN53 185 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 ANKDD1BA6NHY2 528 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 TMX2-CTNND1H3BSU7 103 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 CLDN7O95471 211 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 FPGSQ05932 587 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 ACOX1Q15067 660 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 TGFBIQ15582 683 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 ZNF284Q2VY69 593 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 C6orf183Q5T699 404 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 HID1Q8IV36 788 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 SETD9Q8NE22 299 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 IGSF5Q9NSI5 407 aa13.1□□□□□ -0.31
CASC4-201ENST00000299957 GJB5O95377 273 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 ALDOCP09972 364 aaKnown RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 CD1DP15813 335 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 SLC6A2P23975 617 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 RANBP10Q6VN20 620 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 LRRC49Q8IUZ0 686 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms