RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ATXN7L1Q9ULK2 861 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 SOX13Q9UN79 622 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CDYLQ9Y232 598 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 IGHV5-10-1A0A0J9YXX1 117 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 SLC5A10A0PJK1 596 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 LILRA5A6NI73 299 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 OR52A4PA6NMU1 304 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 AP3B1O00203 1094 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 TLX3O43711 291 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 OR1I1O60431 355 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 GPC4O75487 556 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 AP2A2O94973 939 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 CPNE6O95741 557 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 C9P02748 559 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 RPLP0P05388 317 aaKnown RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 TPBGLP0DKB5 382 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 ITGALP20701 1170 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 RPL10P27635 214 aaKnown RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 ACTN2P35609 894 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 LIMK2P53671 638 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 SESN2P58004 480 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 BASP1P80723 227 aaKnown RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 LAMB3Q13751 1172 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 RPE65Q16518 533 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 FNBP1LQ5T0N5 605 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 NKAIN2Q5VXU1 208 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 WDR74Q6RFH5 385 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 RBM44Q6ZP01 1051 aaKnown RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM26Q6ZUK4 368 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 USP53Q70EK8 1073 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 GSTA5Q7RTV2 222 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 Q8N9G6 341 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-201ENST00000288344 DNAAF3Q8N9W5 541 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 OR4L1Q8NH43 312 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 BIRC8Q96P09 236 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 DEPDC7Q96QD5 511 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 NUDT22Q9BRQ3 303 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 RAB33BQ9H082 229 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM9Q9P0T7 183 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 ACSL5Q9ULC5 683 aa8.97□□□□□ -0.97
HMGN1-201ENST00000288344 A0A087WV48 116 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 FAM237BA0A1B0GVD1 139 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 MAGEB16A2A368 324 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CCDC78A2IDD5 438 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CTAGE9A4FU28 777 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 SRRM3A6NNA2 597 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 DNALI1O14645 258 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 GSTM1P09488 218 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 THRAP10827 490 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 MSH3P20585 1137 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 IDSP22304 550 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 PDHA2P29803 388 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 NSG1P42857 185 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 EPHA4P54764 986 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 DRG2P55039 364 aaKnown RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ADARP55265 1226 aaKnown RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 GPLD1P80108 840 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 GSTM4Q03013 218 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 HHEXQ03014 270 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 GBX1Q14549 363 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 C16orf72Q14CZ0 275 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 TYSND1Q2T9J0 566 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ANKRD20A4Q4UJ75 823 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 TMEM71Q6P5X7 295 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CES3Q6UWW8 571 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CERS6Q6ZMG9 384 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 PPP1R21Q6ZMI0 780 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CENPUQ71F23 418 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 DET1Q7L5Y6 550 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CLEC14AQ86T13 490 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ZNF761Q86XN6 746 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 TRAPPC5Q8IUR0 188 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 RASGRP3Q8IV61 690 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 IGDCC3Q8IVU1 814 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CCDC116Q8IYX3 515 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 BMPERQ8N8U9 685 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 SPATA4Q8NEY3 305 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 OR4D9Q8NGE8 314 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ZFPM2Q8WW38 1151 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 LRRC45Q96CN5 670 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 RMDN2Q96LZ7 410 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 GFM1Q96RP9 751 aaKnown RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 CCM2Q9BSQ5 444 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 TBC1D10AQ9BXI6 508 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ZCCHC2Q9C0B9 1178 aaKnown RBP8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ABCG4Q9H172 646 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 POLR1BQ9H9Y6 1135 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 RDH14Q9HBH5 336 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 LATS2Q9NRM7 1088 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 POT1Q9NUX5 634 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 BFARQ9NZS9 450 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 EPHA6Q9UF33 1036 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 ACSL6Q9UKU0 697 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 DNAJC16Q9Y2G8 782 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 MED16Q9Y2X0 877 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 SEC16AO15027 2179 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 IGSF10Q6WRI0 2623 aa8.96□□□□□ -0.98
HMGN1-201ENST00000288344 SDR42E2A6NKP2 422 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 RHPN2P1A8MT19 583 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 E7EVH7 732 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms