RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TAF1AQ15573 450 aaPredicted RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 GPR19Q15760 415 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 BBS12Q6ZW61 710 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 KMT5CQ86Y97 462 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 TMEM126BQ8IUX1 230 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 CDKL3Q8IVW4 592 aaPredicted RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 TEX19Q8NA77 164 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 DCUN1D1Q96GG9 259 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 INSM2Q96T92 566 aaPredicted RBP12.46□□□□□ -0.41
CD44-203ENST00000278386 FANCEQ9HB96 536 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 SEMA5BQ9P283 1151 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 PCDHGA6Q9Y5G7 932 aa12.46□□□□□ -0.41
CD44-203ENST00000278386 SPTBP11277 2137 aa12.46□□□□□ -0.42
CD44-203ENST00000278386 OR6C74A6NCV1 312 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 MGAT4DA6NG13 374 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 KCNN4O15554 427 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 SCRG1O75711 98 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 ZBTB11O95625 1053 aaPredicted RBP12.45□□□□□ -0.42
CD44-203ENST00000278386 POLBP06746 335 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 ITGALP20701 1170 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 CYLC1P35663 651 aaPredicted RBP12.45□□□□□ -0.42
CD44-203ENST00000278386 HSD11B2P80365 405 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 TMPRSS15P98073 1019 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 PRKAA1Q13131 559 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 TBX2Q13207 712 aaPredicted RBP12.45□□□□□ -0.42
CD44-203ENST00000278386 BCL7AQ4VC05 210 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 TMTC4Q5T4D3 741 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 METRNLQ641Q3 311 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 FAM199XQ6PEV8 388 aaPredicted RBP12.45□□□□□ -0.42
CD44-203ENST00000278386 ASB18Q6ZVZ8 466 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
CD44-203ENST00000278386 OR13C4Q8NGS5 318 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 OR2L2Q8NH16 312 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 ACTL9Q8TC94 416 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 HM13Q8TCT9 377 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 ULK4Q96C45 1275 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 RUFY1Q96T51 708 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 FAM118BQ9BPY3 351 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 GORASP1Q9BQQ3 440 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 TRIM5Q9C035 493 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 KIR3DX1Q9H7L2 352 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 SLC24A2Q9UI40 661 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 ACSL5Q9ULC5 683 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 PCDHA13Q9Y5I0 950 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 HEBP2Q9Y5Z4 205 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 RELNP78509 3460 aa12.45□□□□□ -0.42
CD44-203ENST00000278386 COL12A1Q99715 3063 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 GSAPA4D1B5 854 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 CFAP99D6REC4 459 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 K7EM74 188 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 PJA2O43164 708 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 DNAJB5O75953 348 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 CRTAMO95727 393 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 PYGMP11217 842 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 POLR2CP19387 275 aaPredicted RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 CDH3P22223 829 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 NDUFS1P28331 727 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 KPNA2P52292 529 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 NAP1L1P55209 391 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 EIF3EP60228 445 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 RPS15P62841 145 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 TUBB4BP68371 445 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TUBB2AQ13885 445 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 ANKRD20A2Q5SQ80 823 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 ANKRD20A1Q5TYW2 823 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 ANKRD20A3Q5VUR7 823 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TCTN3Q6NUS6 607 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 DARS2Q6PI48 645 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 FBXO38Q6PIJ6 1188 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 BPHLQ86WA6 291 aaPredicted RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 D2HGDHQ8N465 521 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TC2NQ8N9U0 490 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 SEC14L1Q92503 715 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 MR1Q95460 341 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 FCRL4Q96PJ5 515 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TBL1YQ9BQ87 522 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TUBB2BQ9BVA1 445 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TLR10Q9BXR5 811 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 FAM96AQ9H5X1 160 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 ANKMY1Q9P2S6 941 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 TLK1Q9UKI8 766 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 PLAAQ9Y263 795 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 AAR2Q9Y312 384 aaKnown RBP12.44□□□□□ -0.42
CD44-203ENST00000278386 COLEC10Q9Y6Z7 277 aa12.44□□□□□ -0.42
CD44-203ENST00000278386 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 CCL22O00626 93 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 IPO7O95373 1038 aaKnown RBP12.43□□□□□ -0.42
CD44-203ENST00000278386 PTMAP06454 111 aaKnown RBP12.43□□□□□ -0.42
CD44-203ENST00000278386 RBP3P10745 1247 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 PTPN4P29074 926 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 CTNNA1P35221 906 aaKnown RBP12.43□□□□□ -0.42
CD44-203ENST00000278386 ADRA1AP35348 466 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 CETN2P41208 172 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 PRLHRP49683 370 aa12.43□□□□□ -0.42
CD44-203ENST00000278386 MLLT10P55197 1068 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms