RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OR4F6Q8NGB9 312 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 OR9I1Q8NGQ6 314 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 METTL6Q8TCB7 284 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 GDPD5Q8WTR4 605 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 UBTD2Q8WUN7 234 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 BTN2A2Q8WVV5 523 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 ATP6V1E2Q96A05 226 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 ZSCAN5AQ9BUG6 496 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 PBX4Q9BYU1 374 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 S100A14Q9HCY8 104 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 HPS4Q9NQG7 708 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 PACSIN3Q9UKS6 424 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 LRRC42Q9Y546 428 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 EDDM13A0A1B0GTR0 161 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 EPOPA6NHQ4 379 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 FADS2P1A8MWK0 482 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 KPNA3O00505 521 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SGTAO43765 313 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 NUAK1O60285 661 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MTX2O75431 263 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 AP2A2O94973 939 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MATN4O95460 622 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 OTCP00480 354 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 CAPN1P07384 714 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ANXA5P08758 320 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 HLA-EP13747 358 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MSH3P20585 1137 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 GDF5P43026 501 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MRPL19P49406 292 aaKnown RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 HSPA14Q0VDF9 509 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 GRIK2Q13002 908 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 CEACAM7Q14002 265 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 EIF4HQ15056 248 aaKnown RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 RPS6KA2Q15349 733 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ERAP2Q6P179 960 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 TTC23LQ6PF05 361 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 Q6ZSR9 355 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MILR1Q7Z6M3 343 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 NRSN1Q8IZ57 195 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 CHCHD4Q8N4Q1 142 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 NRG4Q8WWG1 115 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ASB11Q8WXH4 323 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 JADE3Q92613 823 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ARRDC3Q96B67 414 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 CCDC124Q96CT7 223 aaKnown RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ANKRD27Q96NW4 1050 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 FAM129BQ96TA1 746 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 TMEM79Q9BSE2 394 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SLC12A9Q9BXP2 914 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ZFP14Q9HCL3 533 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SDR39U1Q9NRG7 319 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 RIC8BQ9NVN3 520 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 CACNA2D2Q9NY47 1150 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 WWOXQ9NZC7 414 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ANGPTL2Q9UKU9 493 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PDE10AQ9Y233 779 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ANGPTL3Q9Y5C1 460 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PCDHGA7Q9Y5G6 932 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 GPR45Q9Y5Y3 372 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PDE4DIPQ5VU43 2346 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 K7EPI3 171 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PSMD11O00231 422 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 MRASO14807 208 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SLC16A5O15375 505 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 KATNA1O75449 491 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 C8GP07360 202 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ELFN1P0C7U0 828 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 IDO1P14902 403 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ME2P23368 584 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 GGT5P36269 586 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 VHLP40337 213 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 RPIAP49247 311 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 THOP1P52888 689 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SESN3P58005 492 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 CDKL1Q00532 357 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 TRAF3Q13114 568 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF234Q14588 700 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 GRIN2CQ14957 1233 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ACOX1Q15067 660 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF648Q5T619 568 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 VITQ6UXI7 678 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SERPINA13PQ6UXR4 307 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 HACD2Q6Y1H2 254 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 TMEM184AQ6ZMB5 413 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 LRRC74BQ6ZQY2 392 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 UBE2R2Q712K3 238 aaPredicted RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 ADGRG6Q86SQ4 1221 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 VRK3Q8IV63 474 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 SFTPA1Q8IWL2 248 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 RAVER1Q8IY67 606 aaKnown RBP9.41□□□□□ -0.9
TRIM55-201ENST00000276573 DCBLD1Q8N8Z6 715 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 OR2T11Q8NH01 316 aa9.41□□□□□ -0.9
TRIM55-201ENST00000276573 PIP4K2CQ8TBX8 421 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms