RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 TAS1R3Q7RTX0 852 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF227Q86WZ6 799 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 RAVER1Q8IY67 606 aaKnown RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 OR2AJ1Q8NGZ0 328 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SLC5A5Q92911 643 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 IKZF2Q9UKS7 526 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 A0A1B0GVC2 190 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 RTP1P59025 263 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CCNYL2Q5T2Q4 361 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 PIF1Q9H611 641 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 C8orf33Q9H7E9 229 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 AP2A2O94973 939 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 PET100P0DJ07 73 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CDK9P50750 372 aaKnown RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SPIBQ01892 262 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SPOCK1Q08629 439 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 MTM1Q13496 603 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 GCNT7Q6ZNI0 430 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SLC24A5Q71RS6 500 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 MYO19Q96H55 970 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 PPP4R1LQ9P1A2 415 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SYN3O14994 580 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 TUSC3Q13454 348 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 SGCBQ16585 318 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 NBPF12Q5TAG4 269 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CXCL17Q6UXB2 119 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 C16orf59Q7L2K0 433 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 GALNT12Q8IXK2 581 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 OR4L1Q8NH43 312 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 LCN9Q8WX39 176 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 AZIN2Q96A70 460 aa13.11□□□□□ -0.31
PRDM16-201ENST00000270722 CASP9P55211 416 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 VLDLRP98155 873 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 CDK18Q07002 472 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ALG9Q9H6U8 611 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 SELPP16109 830 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ARRB1P49407 418 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 C1orf216Q8TAB5 229 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 TMBIM4Q9HC24 238 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 SEMA4BQ9NPR2 832 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 TIMM13Q9Y5L4 95 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 DUXAA6NLW8 204 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ECHS1P30084 290 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF155Q12901 538 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ARHGAP36Q6ZRI8 547 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 MAP4K3Q8IVH8 894 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 TXN2Q99757 166 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ACSL5Q9ULC5 683 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 HYKKA2RU49 373 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 RLN1P04808 185 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ARP10275 920 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 BGNP21810 368 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 MIPP30301 263 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 GNA12Q03113 381 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 BMPR2Q13873 1038 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 PTPN20Q4JDL3 420 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 RAB12Q6IQ22 244 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 CDYL2Q8N8U2 506 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 TREM1Q9NP99 234 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 MAFFQ9ULX9 164 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 MAN2B2Q9Y2E5 1009 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 EFCAB7A8K855 629 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 HCN1O60741 890 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 SLC10A7Q0GE19 358 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 BAP1Q92560 729 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 MGME1Q9BQP7 344 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 IFT46Q9NQC8 304 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 PDCD5O14737 125 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 CDKN2CP42773 168 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 RPL6Q02878 288 aaKnown RBP13.1□□□□□ -0.31
PRDM16-201ENST00000270722 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 LRRC34Q8IZ02 419 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 SLC38A4Q969I6 547 aa13.1□□□□□ -0.31
PRDM16-201ENST00000270722 DHRS1Q96LJ7 313 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms