RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 UGT2B15P54855 530 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 FOLH1Q04609 750 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 MTAPQ13126 283 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 DGUOKQ16854 277 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 SPANXN2Q5MJ10 180 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ZC3HC1Q86WB0 502 aaKnown RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 KBTBD7Q8WVZ9 684 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 LCN9Q8WX39 176 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 Q96MT0 163 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 SLC38A2Q96QD8 506 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 DENND2DQ9H6A0 471 aaPredicted RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 CLN6Q9NWW5 311 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ELOVL7A1L3X0 281 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 AHSGP02765 367 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 PNLIPRP1P54315 467 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ITGA1P56199 1179 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 LIPEQ05469 1076 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 RAB30Q15771 203 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 CHRNA6Q15825 494 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ARMC4Q5T2S8 1044 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 NAIF1Q69YI7 327 aaPredicted RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 AHI1Q8N157 1196 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ZNF540Q8NDQ6 660 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 PNPT1Q8TCS8 783 aaKnown RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ADAMTS15Q8TE58 950 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 XAGE5Q8WWM1 108 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 SLC47A1Q96FL8 570 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 RIOK2Q9BVS4 552 aaKnown RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 POLR1BQ9H9Y6 1135 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 POLMQ9NP87 494 aaPredicted RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 KLHL1Q9NR64 748 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 C1orf109Q9NX04 203 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 KCTD3Q9Y597 815 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 LEFTY2O00292 366 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 PI15O43692 258 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 CLDN7O95471 211 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 HIST1H2ABP04908 130 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 C16orf72Q14CZ0 275 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 BRAT1Q6PJG6 821 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 HIST3H2AQ7L7L0 130 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 AMZ2Q86W34 360 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 CLDN19Q8N6F1 224 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 C19orf18Q8NEA5 215 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 HIST1H2ACQ93077 130 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 TEFMQ96QE5 360 aaKnown RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 MUC13Q9H3R2 512 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 OXSMQ9NWU1 459 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 COL16A1Q07092 1604 aaPredicted RBP15.2■□□□□ 0.02
TIMP3-201ENST00000266085 K7EPI3 171 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 PRAMEF11O60813 436 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 STX11O75558 287 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 FYNP06241 537 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 CLDN10P78369 228 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 STX4Q12846 297 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 MYLK3Q32MK0 819 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 MTX3Q5HYI7 312 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 DEF8Q6ZN54 512 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 SIGLEC10Q96LC7 697 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 TAS2R1Q9NYW7 299 aa15.2■□□□□ 0.02
TIMP3-201ENST00000266085 LOC100506127A0A0U1RQW1 187 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 CCDC189A1A4V9 331 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 FPGTO14772 594 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 CCNYL3P0C7X3 344 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 GSTM5P46439 218 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 MAPK12P53778 367 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 PTSQ03393 145 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 TRAF3Q13114 568 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 CIB1Q99828 191 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 ALG2Q9H553 416 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 NBNO60934 754 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 IMPDH1P20839 514 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 PAOXQ6QHF9 649 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 SLC39A5Q6ZMH5 540 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 SLC2A13Q96QE2 648 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 EBF4Q9BQW3 602 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 EBF3Q9H4W6 596 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 SEC14L3Q9UDX4 400 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 KDELR3O43731 214 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 LBX1P52954 281 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 HERVK_113P63132 956 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 SIPA1Q96FS4 1042 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 ERVK-6Q9BXR3 956 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 ZDHHC4Q9NPG8 344 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 ZDHHC3Q9NYG2 299 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 BTAF1O14981 1849 aa15.19■□□□□ 0.02
TIMP3-201ENST00000266085 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
TIMP3-201ENST00000266085 SIX3O95343 332 aaPredicted RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 KLF1Q13351 362 aaPredicted RBP15.18■□□□□ 0.02
TIMP3-201ENST00000266085 LPCAT4Q643R3 524 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 RINLQ6ZS11 566 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 PYCR2Q96C36 320 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 ROPN1LQ96C74 230 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 NUAK2Q9H093 628 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 LMAN2LQ9H0V9 348 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 IL36AQ9UHA7 158 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 GSTK1Q9Y2Q3 226 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 SMIM31A0A1B0GVY4 71 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 CAPN8A6NHC0 703 aa15.18■□□□□ 0.02
TIMP3-201ENST00000266085 A8MUI8 341 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms