RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SPRP35270 261 aaPredicted RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 CLK1P49759 484 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 CSRP3P50461 194 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 UBE3AQ05086 875 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GBX1Q14549 363 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GRM7Q14831 915 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 TAB1Q15750 504 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 KIF19Q2TAC6 998 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GPAT3Q53EU6 434 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GALNT5Q7Z7M9 940 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PYROXD2Q8N2H3 581 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PAPD5Q8NDF8 572 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 RAET1EQ8TD07 263 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 FBXW5Q969U6 566 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 BARD1Q99728 777 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 NUAK2Q9H093 628 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 ALG2Q9H553 416 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PDLIM7Q9NR12 457 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 INTS7Q9NVH2 962 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 MUTYHQ9UIF7 546 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 SNX7Q9UNH6 387 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 MGAMO43451 1857 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 FAM92AA1XBS5 289 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 C16orf96A6NNT2 1141 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TLL1O43897 1013 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 AOC2O75106 756 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 FTH1P02794 183 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 PDGFAP04085 211 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 GPIP06744 558 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 CYP2F1P24903 491 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 AZGP1P25311 298 aaKnown RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 GRK3P35626 688 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 GRIK1P39086 918 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 CASP2P42575 452 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 ARHGDIAP52565 204 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 GABARAPL2P60520 117 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TAP1Q03518 808 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TYSND1Q2T9J0 566 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 BTBD16Q32M84 506 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 ANKS3Q6ZW76 656 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 LARP4Q71RC2 724 aaKnown RBP eCLIP8.65□□□□□ -1.02
VAPB-201ENST00000265619 PHF21BQ96EK2 531 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TRAF4Q9BUZ4 470 aaPredicted RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 KCNN2Q9H2S1 579 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 NGRNQ9NPE2 291 aaKnown RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 C8orf4Q9NR00 106 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 PCDHB14Q9Y5E9 798 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 U3KQV3 271 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 LOC100130705A0A1B0GUX0 176 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 FAM25AB3EWG3 89 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 FAM25CB3EWG5 89 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 FAM25GB3EWG6 89 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 H3BRB1 525 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 SOCS7O14512 581 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 GAS2O43903 313 aaKnown RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 MPOP05164 745 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 PDGFRAP16234 1089 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TBXAS1P24557 533 aaPredicted RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 EPHA2P29317 976 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 MTHFRP42898 656 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 MAPK12P53778 367 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 FCGRTP55899 365 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TRAF3Q13114 568 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 MFSD13AQ14CX5 517 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 BAK1Q16611 211 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 ARHGAP17Q68EM7 881 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 ENPP6Q6UWR7 440 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 HACD2Q6Y1H2 254 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 OR10Q1Q8NGQ4 319 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 MSANTD3Q96H12 275 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 AKTIPQ9H8T0 292 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 ERVMER34-1Q9H9K5 563 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 SLC52A3Q9NQ40 469 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TMPRSS4Q9NRS4 437 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 NPAP1Q9NZP6 1156 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 TLK1Q9UKI8 766 aa8.65□□□□□ -1.02
VAPB-201ENST00000265619 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.65□□□□□ -1.02
VAPB-201ENST00000265619 MN1Q10571 1320 aaPredicted RBP8.65□□□□□ -1.02
VAPB-201ENST00000265619 PAPPA2Q9BXP8 1791 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 OTOFQ9HC10 1997 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 CARNS1A5YM72 827 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 TRPC5OSA6NMA1 111 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 EEF2KO00418 725 aaKnown RBP8.65□□□□□ -1.03
VAPB-201ENST00000265619 TSC22D2O75157 780 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 H2AFYO75367 372 aaKnown RBP8.65□□□□□ -1.03
VAPB-201ENST00000265619 CNTN5O94779 1100 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 CSF2P04141 144 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 SMPD1P17405 629 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 PFKLP17858 780 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 FOXA1P55317 472 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 IL5RAQ01344 420 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 FAPQ12884 760 aa8.65□□□□□ -1.03
VAPB-201ENST00000265619 USP10Q14694 798 aaKnown RBP8.65□□□□□ -1.03
VAPB-201ENST00000265619 SYT6Q5T7P8 510 aaPredicted RBP8.65□□□□□ -1.03
VAPB-201ENST00000265619 EEF1DP3Q658K8 133 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1041.4 ms