RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 UNC13CQ8NB66 2214 aa13.14□□□□□ -0.31
SGCA-201ENST00000262018 TTC24A2A3L6 582 aaPredicted RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 TYROBPO43914 113 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 MT-ND3P03897 115 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 HLA-DPA1P20036 260 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 NMBRP28336 390 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 DCTP40126 519 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 CHRNA4P43681 627 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 RECQLP46063 649 aaPredicted RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 PFN3P60673 137 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SLC18A2Q05940 514 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 CDK18Q07002 472 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 PTK2BQ14289 1009 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 CAPRIN2Q6IMN6 1127 aaKnown RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 PACS1Q6VY07 963 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SH2D5Q6ZV89 423 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 MICALCLQ6ZW33 695 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SLC25A41Q8N5S1 370 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 OR2A12Q8NGT7 310 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 DENND1AQ8TEH3 1009 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TBATAQ96M53 351 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 LENG8Q96PV6 779 aaPredicted RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 GPR34Q9UPC5 381 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 RNF215Q9Y6U7 377 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 IGLON5A6NGN9 336 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TRIM49D1C9J1S8 452 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 INSIG1O15503 277 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 NKX2-8O15522 239 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SEMA7AO75326 666 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 ZNF821O75541 412 aaPredicted RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 GSRP00390 522 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 FGF1P05230 155 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 ERVK-10P10266 1014 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 KRT4P19013 534 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 RGRP47804 291 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 NEK3P51956 506 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 RHOAP61586 193 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SNRPD1P62314 119 aaKnown RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 PPARDQ03181 441 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
SGCA-201ENST00000262018 POU6F1Q14863 301 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 RALGPS1Q5JS13 557 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TEDDM1Q5T9Z0 273 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 KDELC2Q7Z4H8 507 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TICAM1Q8IUC6 712 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 BANPQ8N9N5 519 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 OR2AP1Q8NGE2 309 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 GPBAR1Q8TDU6 330 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 PPP1R16AQ96I34 528 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TRIB3Q96RU7 358 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 CPNE1Q99829 537 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TNKS2Q9H2K2 1166 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 NOD2Q9HC29 1040 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 TREX1Q9NSU2 369 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
SGCA-201ENST00000262018 ZFATQ9P243 1243 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 LHX3Q9UBR4 397 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 FADS3Q9Y5Q0 445 aa13.13□□□□□ -0.31
SGCA-201ENST00000262018 SDK2Q58EX2 2172 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 ANKRD36A6QL64 1941 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 HEATR9A2RTY3 570 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 HMX2A2RU54 273 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 SPAG7O75391 227 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 NDST3O95803 873 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 IGSF6O95976 241 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 CCL4P13236 92 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 ADRB3P13945 408 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 GP5P40197 560 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 CCNFP41002 786 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 C16orf72Q14CZ0 275 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 CARD16Q5EG05 197 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 GRTP1Q5TC63 336 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 KIAA0930Q6ICG6 404 aaPredicted RBP13.12□□□□□ -0.31
SGCA-201ENST00000262018 DPY19L3Q6ZPD9 716 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 KCNMB4Q86W47 210 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 HEATR4Q86WZ0 1026 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 FSTL5Q8N475 847 aaPredicted RBP13.12□□□□□ -0.31
SGCA-201ENST00000262018 ANKRD42Q8N9B4 389 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 OR6C4Q8NGE1 309 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 TM6SF2Q9BZW4 377 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 ZNF768Q9H5H4 540 aaKnown RBP13.12□□□□□ -0.31
SGCA-201ENST00000262018 C20orf96Q9NUD7 363 aaPredicted RBP13.12□□□□□ -0.31
SGCA-201ENST00000262018 MKS1Q9NXB0 559 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 NSMCE4AQ9NXX6 385 aa13.12□□□□□ -0.31
SGCA-201ENST00000262018 IL36AQ9UHA7 158 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms