RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 OR4C6Q8NH72 309 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 UHMK1Q8TAS1 419 aaKnown RBP11.39□□□□□ -0.59
PFDN1-201ENST00000261813 RHBDD1Q8TEB9 315 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.59
PFDN1-201ENST00000261813 MTBPQ96DY7 904 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 PGM2Q96G03 612 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 TCF12Q99081 682 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 COPS8Q99627 209 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 CPNE1Q99829 537 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 PLAC1Q9HBJ0 212 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 ATP13A2Q9NQ11 1180 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 ZDHHC3Q9NYG2 299 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 NLGN3Q9NZ94 848 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 MARCH4Q9P2E8 410 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-201ENST00000261813 PSMC3IPQ9P2W1 217 aaPredicted RBP11.39□□□□□ -0.59
PFDN1-201ENST00000261813 ZNHIT2Q9UHR6 403 aa11.39□□□□□ -0.59
PFDN1-201ENST00000261813 TLDC2A0PJX2 215 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 NEMP2A6NFY4 417 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 OR2AG2A6NM03 316 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 LMO7DNF2Z398 122 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 GOLGA8TH3BQL2 631 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SIGLEC6O43699 453 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SGTAO43765 313 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SASH3O75995 380 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SHBGP04278 402 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 ACP5P13686 325 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 MSH3P20585 1137 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 CSRP1P21291 193 aaKnown RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 CSE1LP55060 971 aaKnown RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 DNAJC3Q13217 504 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 GTF2H3Q13889 308 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 INAVAQ3KP66 663 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 FASTKD1Q53R41 847 aaKnown RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 GRTP1Q5TC63 336 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 LYPLAL1Q5VWZ2 237 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 TMEM220Q6QAJ8 160 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 CERS6Q6ZMG9 384 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 DET1Q7L5Y6 550 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 CHST15Q7LFX5 561 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 TAF8Q7Z7C8 310 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 C11orf96Q7Z7L8 435 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 GALNT7Q86SF2 657 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 LDB1Q86U70 411 aaPredicted RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 LRRTM4Q86VH4 590 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 GKN2Q86XP6 184 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 TRAPPC5Q8IUR0 188 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 CNTN4Q8IWV2 1026 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 PPM1NQ8N819 430 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 GPR150Q8NGU9 434 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SLC44A1Q8WWI5 657 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SH3GL2Q99962 352 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 ZCCHC2Q9C0B9 1178 aaKnown RBP11.38□□□□□ -0.59
PFDN1-201ENST00000261813 CATSPERZQ9NTU4 200 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 IL1RAPL1Q9NZN1 696 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 SLC23A2Q9UGH3 650 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 ZFHX4Q86UP3 3567 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 KNL1Q8NG31 2342 aa11.38□□□□□ -0.59
PFDN1-201ENST00000261813 COL5A1P20908 1838 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 MAP1BP46821 2468 aaKnown RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 LY6G6EA0A0G2JKS1 128 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 TPP1O14773 563 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 GIPC1O14908 333 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 KMOO15229 486 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 CD3EAPO15446 510 aaKnown RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 CAPN5O15484 640 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 OR1I1O60431 355 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ANXA6P08133 673 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ERVK-10P10266 1014 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ALPPL2P10696 532 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 MYF5P13349 255 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ATP1B2P14415 290 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 OGNP20774 298 aaKnown RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 PMLP29590 882 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 SPRP35270 261 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 GP5P40197 560 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ACTR1BP42025 376 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ACTR1AP61163 376 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 SHC2P98077 582 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ILF3Q12906 894 aaKnown RBP eCLIP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 LRP8Q14114 963 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 ITIH4Q14624 930 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 HSP90AA5PQ58FG0 334 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 TEDDM1Q5T9Z0 273 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 RNF187Q5TA31 235 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 N4BP2L1Q5TBK1 243 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 AGBL2Q5U5Z8 902 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 TRMT10BQ6PF06 316 aaKnown RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 SLC30A9Q6PML9 568 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 LVRNQ6Q4G3 990 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 VASH1Q7L8A9 365 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 SFTPA2Q8IWL1 248 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 UNC5BQ8IZJ1 945 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 SDR16C5Q8N3Y7 309 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 BEND7Q8N7W2 519 aaPredicted RBP11.37□□□□□ -0.59
PFDN1-201ENST00000261813 OR2W6PQ8NHA6 318 aa11.37□□□□□ -0.59
PFDN1-201ENST00000261813 SGF29Q96ES7 293 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms