RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CD151P48509 253 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 GPLD1P80108 840 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 ILF2Q12905 390 aaKnown RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CTBP1Q13363 440 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 BOP1Q14137 746 aaKnown RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 NR1D2Q14995 579 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 SMAD1Q15797 465 aaKnown RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CLPPQ16740 277 aaPredicted RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 STEAP4Q687X5 459 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 FAM83HQ6ZRV2 1179 aaPredicted RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 KIAA0408Q6ZU52 694 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 IGDCC3Q8IVU1 814 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CACTIN-AS1Q8N1I8 211 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CHCHD4Q8N4Q1 142 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 Q8N9G6 341 aaPredicted RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 OR10G6Q8NH81 332 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 NAT14Q8WUY8 206 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 ZFPM2Q8WW38 1151 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CCDC97Q96F63 343 aaPredicted RBP18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 C12orf66Q96MD2 445 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 DEPDC7Q96QD5 511 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 DPYSL5Q9BPU6 564 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 WWP1Q9H0M0 922 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 P2RY12Q9H244 342 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 LRRN3Q9H3W5 708 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 UCK1Q9HA47 277 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 NSMCE4AQ9NXX6 385 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 IL1RAPL1Q9NZN1 696 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 FBXO5Q9UKT4 447 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CLCA2Q9UQC9 943 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 CRYL1Q9Y2S2 319 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 ESYT3A0FGR9 886 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 TMX2-CTNND1H3BSU7 103 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 PPM1DO15297 605 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 RPLP0P05388 317 aaKnown RBP18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 ERVK-10P10266 1014 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 SLC1A2P43004 574 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 EPHA4P54764 986 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 TUBB4BP68371 445 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 INSM1Q01101 510 aaPredicted RBP18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 HES3Q5TGS1 186 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 RBM44Q6ZP01 1051 aaKnown RBP18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 MICALCLQ6ZW33 695 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 OTOAQ7RTW8 1153 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 TMPRSS7Q7RTY8 843 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 SPRED1Q7Z699 444 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 SFTPA2Q8IWL1 248 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 IFT20Q8IY31 132 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 IFT81Q8WYA0 676 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 LPGAT1Q92604 370 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 CDKL2Q92772 493 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 GRAMD1AQ96CP6 724 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 L2HGDHQ9H9P8 463 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 IMP3Q9NV31 184 aaKnown RBP18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 ZFATQ9P243 1243 aa18.35■□□□□ 0.53
CYSTM1-201ENST00000261811 OR52A4PA6NMU1 304 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 DUX1O43812 170 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 KDM1AO60341 852 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 S1PR4O95977 384 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 MTHFD1P11586 935 aaKnown RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 PKMP14618 531 aaKnown RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 BRAFP15056 766 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 ITGB6P18564 788 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 CHRM3P20309 590 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 SLC19A1P41440 591 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 UBE2IP63279 158 aaKnown RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 MGAT5Q09328 741 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 CUL1Q13616 776 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 CLCA4Q14CN2 919 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 RPE65Q16518 533 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 PIM3Q86V86 326 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 DENND6AQ8IWF6 608 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 C2CD4AQ8NCU7 369 aaPredicted RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 FBXO6Q9NRD1 293 aaPredicted RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 SCHIP1Q9P0W5 487 aaPredicted RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 ZNF624Q9P2J8 865 aaPredicted RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 DMGDHQ9UI17 866 aaKnown RBP18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 ANGPTL2Q9UKU9 493 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 WDR37Q9Y2I8 494 aa18.34■□□□□ 0.53
CYSTM1-201ENST00000261811 LILRA5A6NI73 299 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 HYAL3O43820 417 aaPredicted RBP18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 SPAG6O75602 509 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 CPNE6O95741 557 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 MT-CO3P00414 261 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 RPN2P04844 631 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 MAGEA4P43358 317 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 LEPRP48357 1165 aaKnown RBP18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 CARSP49589 748 aaKnown RBP18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 OR1D5P58170 312 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 CCL7P80098 99 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 HSPA14Q0VDF9 509 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 BRD3Q15059 726 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 TTLL9Q3SXZ7 439 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 AMZ1Q400G9 498 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 MAP9Q49MG5 647 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 CAPRIN2Q6IMN6 1127 aaKnown RBP18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 KLHL35Q6PF15 583 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 ZDHHC24Q6UX98 284 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms