RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MAFAQ8NHW3 353 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 GRK7Q8WTQ7 553 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ATXN7L3BQ96GX2 97 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 DDX56Q9NY93 547 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 FBLN5Q9UBX5 448 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PRKAG2Q9UGJ0 569 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PCDHGA7Q9Y5G6 932 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 GMEB1Q9Y692 573 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 HACD1B0YJ81 288 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 E7EVH7 732 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 MED7O43513 233 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PSIP1O75475 530 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 TJP3O95049 919 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SERPINB3P29508 390 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 HNRNPH1P31943 449 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 ASPHQ12797 758 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PPIGQ13427 754 aaKnown RBP eCLIP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PLA2G2CQ5R387 149 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 PSRC1Q6PGN9 363 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 BRSK1Q8TDC3 778 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 TM4SF19Q96DZ7 209 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 GIMAP5Q96F15 307 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SAR1AQ9NR31 198 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SIRT5Q9NXA8 310 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 TXNDC16Q9P2K2 825 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC17A4Q9Y2C5 497 aa5.51□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM208BQ5VWN6 2430 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PRORSD1PA6NEY8 169 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 SRP72O76094 671 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PARNO95453 639 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PREPP48147 710 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 IRX4P78413 519 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 CCNIQ14094 377 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 FZD2Q14332 565 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PCSK7Q16549 785 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 ABI3BPQ7Z7G0 1075 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 TDRD5Q8NAT2 981 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PDLIM5Q96HC4 596 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 TEFMQ96QE5 360 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 DUS2Q9NX74 493 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 KCMF1Q9P0J7 381 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 HEY2Q9UBP5 337 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PACSIN3Q9UKS6 424 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PCNX1Q96RV3 2341 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 IGHV1OR15-9A0A0B4J2B8 117 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 FFAR1O14842 300 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 NOBOXO60393 691 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 INHBCP55103 352 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 CCDC15Q0P6D6 951 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 SFSWAPQ12872 951 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 ABRAXAS2Q15018 415 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 FBXL19Q6PCT2 694 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 NDUFAF2Q8N183 169 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF473Q8WTR7 871 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 OR1E3Q8WZA6 343 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 BIRC7Q96CA5 298 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 DTD2Q96FN9 168 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 RBM41Q96IZ5 413 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 LINC00615Q96LM1 132 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM111AQ96PZ2 611 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 TTC1Q99614 292 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 GPA33Q99795 319 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 MRPL9Q9BYD2 267 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 KLHL31Q9H511 634 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 LIMD1Q9UGP4 676 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 DTX4Q9Y2E6 619 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 SNX13Q9Y5W8 968 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 B3GALT1Q9Y5Z6 326 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 HTR1AP08908 422 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 MSX2P35548 267 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PPARGP37231 505 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 TPMTP51580 245 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 KIAA1161Q6NSJ0 714 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 RETSATQ6NUM9 610 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 WDR75Q8IWA0 830 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF285Q96NJ3 590 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 SORBS1Q9BX66 1292 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 ACPTQ9BZG2 426 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 FBXO44Q9H4M3 255 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 MUTYHQ9UIF7 546 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC8A2Q9UPR5 921 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF711Q9Y462 761 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 KLK4Q9Y5K2 254 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 KPNA2P52292 529 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 DCDC1P59894 354 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 UBE2IP63279 158 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 TSNQ15631 228 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 CRY1Q16526 586 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 KIF19Q2TAC6 998 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 LEXMQ3ZCV2 418 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 GTDC1Q4AE62 458 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PCSK4Q6UW60 755 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM124AQ86V42 546 aa5.5□□□□□ -1.53
TOPBP1-201ENST00000260810 PPFIBP2Q8ND30 876 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms