RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CERS6Q6ZMG9 384 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 BEND7Q8N7W2 519 aaPredicted RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SNF8Q96H20 258 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SIGLEC10Q96LC7 697 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 PRDM8Q9NQV8 689 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 LRIT1Q9P2V4 623 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 ANAPC5Q9UJX4 755 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 GOLGA4Q13439 2230 aaKnown RBP16.46■□□□□ 0.23
SDCBP-201ENST00000260130 TRBV23OR9-2A0A075B6M9 112 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 FAM237BA0A1B0GVD1 139 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 A6NCN8 305 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 SMAPO00193 183 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 F3P13726 295 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 NSG1P42857 185 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 IYDQ6PHW0 289 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 GALNT15Q8N3T1 639 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 MAPK15Q8TD08 544 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC74AQ96AQ1 378 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC3Q9BQI4 270 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 CATSPERZQ9NTU4 200 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 RNF215Q9Y6U7 377 aa16.46■□□□□ 0.23
SDCBP-201ENST00000260130 CCT8L1PA6NM43 557 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 VAPBO95292 243 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 SLC2A4P14672 509 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 PNLIPP16233 465 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 IDSP22304 550 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 DMPKQ09013 629 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 BIRC2Q13490 618 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 TNFAIP8L3Q5GJ75 292 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 HIBCHQ6NVY1 386 aaPredicted RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 TMPRSS7Q7RTY8 843 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 PIGWQ7Z7B1 504 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 AGGF1Q8N302 714 aaeCLIP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 SFRP1Q8N474 314 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 CLDN19Q8N6F1 224 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 SCNM1Q9BWG6 230 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 WHRNQ9P202 907 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 RABGEF1Q9UJ41 708 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 PLXNB3Q9ULL4 1909 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 KLHL33A6NCF5 533 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 MGAT4DA6NG13 374 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 OR5K4A6NMS3 321 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 CD3EAPO15446 510 aaKnown RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 PPARGP37231 505 aaPredicted RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 PRLHRP49683 370 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 ITGA8P53708 1063 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 INSM1Q01101 510 aaPredicted RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 PACS1Q6VY07 963 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 TMEM135Q86UB9 458 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 TMPRSS12Q86WS5 348 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 OR2L2Q8NH16 312 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 EPS8L3Q8TE67 593 aaKnown RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 SLC37A2Q8TED4 501 aa16.45■□□□□ 0.22
SDCBP-201ENST00000260130 TRIM56Q9BRZ2 755 aaKnown RBP16.45■□□□□ 0.22
SDCBP-201ENST00000260130 KIR2DS5A0A0G2JLQ3 304 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 A0A0G2JNG1 304 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 RHPN2P1A8MT19 583 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 KIR2DS3K7RE56 304 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 GSTA1P08263 222 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 PAMP19021 973 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 SPINK2P20155 84 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ARNTP27540 789 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 RPL10P27635 214 aaKnown RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 PBLDP30039 288 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ATP5DP30049 168 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 SHC2P98077 582 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 SEMA3AQ14563 771 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 KIR2DS5Q14953 304 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 SNCBQ16143 134 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ANKRD20A4Q4UJ75 823 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 AARS2Q5JTZ9 985 aaKnown RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 KIAA0930Q6ICG6 404 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 CYB5D1Q6P9G0 228 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ABRAXAS1Q6UWZ7 409 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 WASH2PQ6VEQ5 465 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 FCRL3Q96P31 734 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 WASH6PQ9NQA3 447 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 MARCH4Q9P2E8 410 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ANGPTL2Q9UKU9 493 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 RPS6KL1Q9Y6S9 549 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 PDZK1P1A8MUH7 402 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 NDC80O14777 642 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 PPM1DO15297 605 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 AP2A2O94973 939 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 FASLGP48023 281 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ARCN1P48444 511 aaKnown RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 CLDN6P56747 220 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 NFE2L1Q14494 772 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 SEPT7Q16181 437 aaKnown RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 HES3Q5TGS1 186 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 AGAP9Q5VTM2 703 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 PARP9Q8IXQ6 854 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 PDIK1LQ8N165 341 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 ZNF669Q96BR6 464 aaPredicted RBP16.44■□□□□ 0.22
SDCBP-201ENST00000260130 STAMBPL1Q96FJ0 436 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 KLK13Q9UKR3 277 aa16.44■□□□□ 0.22
SDCBP-201ENST00000260130 C17orf113A0A1B0GUU1 675 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms