RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
PGBD1-201ENST00000259883 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
PGBD1-201ENST00000259883 SLC47A1Q96FL8 570 aa13.04□□□□□ -0.32
PGBD1-201ENST00000259883 TFB2MQ9H5Q4 396 aaKnown RBP13.04□□□□□ -0.32
PGBD1-201ENST00000259883 ARNT2Q9HBZ2 717 aa13.04□□□□□ -0.32
PGBD1-201ENST00000259883 PKP3Q9Y446 797 aa13.04□□□□□ -0.32
PGBD1-201ENST00000259883 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
PGBD1-201ENST00000259883 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
PGBD1-201ENST00000259883 ZFP37Q9Y6Q3 630 aaPredicted RBP13.04□□□□□ -0.32
PGBD1-201ENST00000259883 MBL2P11226 248 aaPredicted RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 PFKLP17858 780 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ZFP36L2P47974 494 aaKnown RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ATP4BP51164 291 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 BCAP31P51572 246 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 GALNT1Q10472 559 aaPredicted RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 SERINC3Q13530 473 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 SPARTQ8N0X7 666 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ABHD11Q8NFV4 315 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 NDNFQ8TB73 568 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ATP13A1Q9HD20 1204 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 SLC52A3Q9NQ40 469 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 COMMD8Q9NX08 183 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 PDE10AQ9Y233 779 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 TLR6Q9Y2C9 796 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 C5orf42Q9H799 3197 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 UNC80Q8N2C7 3258 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 BCAS1O75363 584 aaPredicted RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 EEDO75530 441 aaKnown RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 FGF1P05230 155 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 AQP1P29972 269 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 GATMP50440 423 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ALDH3A2P51648 485 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ADARB1P78563 741 aaKnown RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 DUSP4Q13115 394 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 TUSC3Q13454 348 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 MAPKAPK3Q16644 382 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 PTRHD1Q6GMV3 140 aaKnown RBP13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ZFP90Q8TF47 636 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 HPS1Q92902 700 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 ULK4Q96C45 1275 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 CRISPLD1Q9H336 500 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
PGBD1-201ENST00000259883 C2orf81A6NN90 581 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 M0R3G1 203 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 TNPO2O14787 897 aaKnown RBP13.02□□□□□ -0.32
PGBD1-201ENST00000259883 MATN4O95460 622 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 ALPLP05186 524 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.32
PGBD1-201ENST00000259883 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.32
PGBD1-201ENST00000259883 SEPHS1P49903 392 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 DGKEP52429 567 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 ZNF33AQ06730 810 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 SLC14A2Q15849 920 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 ARTNQ5T4W7 220 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 XAF1Q6GPH4 301 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 TXNDC11Q6PKC3 985 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 RBM12BQ8IXT5 1001 aaKnown RBP13.02□□□□□ -0.32
PGBD1-201ENST00000259883 LIX1Q8N485 282 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 LZICQ8WZA0 190 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 HTRA1Q92743 480 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.32
PGBD1-201ENST00000259883 CD320Q9NPF0 282 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 FAM118AQ9NWS6 357 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 GIT1Q9Y2X7 761 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 SH3BP1Q9Y3L3 701 aa13.02□□□□□ -0.32
PGBD1-201ENST00000259883 LOC285095A0A1B0GVY8 99 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 F5H5T6 163 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 KDM1AO60341 852 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 NADKO95544 446 aaPredicted RBP13.02□□□□□ -0.33
PGBD1-201ENST00000259883 NDST3O95803 873 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 MLYCDO95822 493 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 SERPINA1P01009 418 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.33
PGBD1-201ENST00000259883 SGSHP51688 502 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 NCS1P62166 190 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 TRIM32Q13049 653 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 ARHGEF7Q14155 803 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 SF1Q15637 639 aaKnown RBP13.02□□□□□ -0.33
PGBD1-201ENST00000259883 LRRC73Q5JTD7 316 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 PYCR2Q96C36 320 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 DUS3LQ96G46 650 aaKnown RBP13.02□□□□□ -0.33
PGBD1-201ENST00000259883 GPR63Q9BZJ6 419 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 DPY30Q9C005 99 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 KLHL25Q9H0H3 589 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 ACTL8Q9H568 366 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 HPS4Q9NQG7 708 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 TMEM248Q9NWD8 314 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.33
PGBD1-201ENST00000259883 ERVK-18Q9QC07 812 aa13.02□□□□□ -0.33
PGBD1-201ENST00000259883 PTBP2Q9UKA9 531 aaKnown RBP13.02□□□□□ -0.33
PGBD1-201ENST00000259883 MICAL3Q7RTP6 2002 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms