RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 THOC5Q13769 683 aaKnown RBP18.28■□□□□ 0.52
UPK3B-201ENST00000257632 KRT33BQ14525 404 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 SYTL3Q4VX76 610 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 WDR36Q8NI36 951 aaKnown RBP18.28■□□□□ 0.52
UPK3B-201ENST00000257632 NCSTNQ92542 709 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 LIN37Q96GY3 246 aaPredicted RBP18.28■□□□□ 0.52
UPK3B-201ENST00000257632 SIGLEC10Q96LC7 697 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 INSM2Q96T92 566 aaPredicted RBP18.28■□□□□ 0.52
UPK3B-201ENST00000257632 TRIM56Q9BRZ2 755 aaKnown RBP18.28■□□□□ 0.52
UPK3B-201ENST00000257632 SEMA6CQ9H3T2 930 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 POLR1BQ9H9Y6 1135 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 SLC40A1Q9NP59 571 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 AKAP7Q9P0M2 348 aaPredicted RBP18.28■□□□□ 0.52
UPK3B-201ENST00000257632 KIF26BQ2KJY2 2108 aa18.28■□□□□ 0.52
UPK3B-201ENST00000257632 PRAMEF33A0A0G2JMD5 474 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 FAM187AA6NFU0 413 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 AGRPO00253 132 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 LIN7AO14910 233 aaPredicted RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 ZZEF1O43149 2961 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 USP1O94782 785 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 ITGB6P18564 788 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 CSF2RBP32927 897 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 ITGA8P53708 1063 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 MRPS25P82663 173 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 ZFP36L1Q07352 338 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 DHX9Q08211 1270 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 RPA4Q13156 261 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 EIF3IQ13347 325 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 SQSTM1Q13501 440 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 BOP1Q14137 746 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 GPR18Q14330 331 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 BRD3Q15059 726 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 PLCL1Q15111 1095 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 BBS9Q3SYG4 887 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 RNF187Q5TA31 235 aaPredicted RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 PTRHD1Q6GMV3 140 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 DUS1LQ6P1R4 473 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 TMEM71Q6P5X7 295 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 RAB11FIP2Q7L804 512 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 TMPRSS9Q7Z410 1059 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 TMEM135Q86UB9 458 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 SLITRK4Q8IW52 837 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 PDIK1LQ8N165 341 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 SPDYE1Q8NFV5 336 aaPredicted RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 OR4D9Q8NGE8 314 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 GPR150Q8NGU9 434 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 RMDN2Q96LZ7 410 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 FCRL3Q96P31 734 aaPredicted RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.27■□□□□ 0.52
UPK3B-201ENST00000257632 GNPTGQ9UJJ9 305 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 CDC23Q9UJX2 597 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 HEBP2Q9Y5Z4 205 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 COLEC10Q9Y6Z7 277 aa18.27■□□□□ 0.52
UPK3B-201ENST00000257632 BPTFQ12830 3046 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 KIF2AO00139 706 aaPredicted RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 BRINP1O60477 761 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 UBXN7O94888 489 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 SEC31AO94979 1220 aaKnown RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 TUBB4AP04350 444 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 HOXB3P14651 431 aaPredicted RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 TYRP1P17643 537 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 PGAM1P18669 254 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 OGNP20774 298 aaKnown RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 MPSTP25325 297 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 RBMS1P29558 406 aaKnown RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 PREPP48147 710 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 ARCN1P48444 511 aaKnown RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 LSSP48449 732 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 HIBCHQ6NVY1 386 aaPredicted RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 NEPROQ6NW34 567 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 LRRC6Q86X45 466 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 LSMEM2Q8N112 164 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 AGGF1Q8N302 714 aaeCLIP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 FBXO39Q8N4B4 442 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 BBOF1Q8ND07 529 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 TMEM159Q96B96 161 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 CCDC74BQ96LY2 380 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 CMKLR1Q99788 373 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 C20orf96Q9NUD7 363 aaPredicted RBP18.26■□□□□ 0.51
UPK3B-201ENST00000257632 IL1RAPL1Q9NZN1 696 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 SNX24Q9Y343 169 aa18.26■□□□□ 0.51
UPK3B-201ENST00000257632 IGHV5-10-1A0A0J9YXX1 117 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 SRRM3A6NNA2 597 aaPredicted RBP18.25■□□□□ 0.51
UPK3B-201ENST00000257632 RAD51CO43502 376 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 BANF1O75531 89 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 JMJD7P0C870 316 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 NDUFS1P28331 727 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 PDHA2P29803 388 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 LIMK2P53671 638 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 EIF3BP55884 814 aaKnown RBP18.25■□□□□ 0.51
UPK3B-201ENST00000257632 ARL4CP56559 192 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 PLOD1Q02809 727 aaPredicted RBP18.25■□□□□ 0.51
UPK3B-201ENST00000257632 CFHR1Q03591 330 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 CALCOCO2Q13137 446 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 TRA2AQ13595 282 aaKnown RBP eCLIP18.25■□□□□ 0.51
UPK3B-201ENST00000257632 HIF1AQ16665 826 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 LONRF1Q17RB8 773 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 TYSND1Q2T9J0 566 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
UPK3B-201ENST00000257632 ZNF470Q6ECI4 717 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms