RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CCL27Q9Y4X3 112 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 OARD1Q9Y530 152 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 H3BNH8 94 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 OTCP00480 354 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 ITGALP20701 1170 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 HRH2P25021 359 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 NR1H2P55055 460 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 LMAN2Q12907 356 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 CHRNA6Q15825 494 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 AP5B1Q2VPB7 878 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 KRT80Q6KB66 452 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 MILR1Q7Z6M3 343 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 TSPAN33Q86UF1 283 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 DPP10Q8N608 796 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 PACRGLQ8N7B6 248 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 PAF1Q8N7H5 531 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZNF558Q96NG5 402 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 HERC2P3Q9BVR0 1158 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 FAM126AQ9BYI3 521 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 CAAP1Q9H8G2 361 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 PNPLA3Q9NST1 481 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 SMOXQ9NWM0 555 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 OAZ3Q9UMX2 235 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 POLR3HQ9Y535 204 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 GLYATL1P3A0A0U1RQE8 302 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 ACOX3O15254 700 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 ENO2P09104 434 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 GNAO1P09471 354 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 RGS4P49798 205 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 DGKQP52824 942 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 OR4D2P58180 307 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 ATP6AP1Q15904 470 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 DGKKQ5KSL6 1271 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 GPRC6AQ5T6X5 926 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 TPGS1Q6ZTW0 290 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 HID1Q8IV36 788 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 BBS7Q8IWZ6 715 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 FAM47BQ8NA70 645 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 VOPP1Q96AW1 172 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 DEFB118Q96PH6 123 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 SH3GL3Q99963 347 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 TMEM45AQ9NWC5 275 aa19.21■□□□□ 0.67
CDC42EP1-201ENST00000249014 MKI67P46013 3256 aaKnown RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 NRG2O14511 850 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 NPPAP01160 153 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 URODP06132 367 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 DGKAP23743 735 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 HTR1EP28566 365 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 HMOX2P30519 316 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 CD70P32970 193 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 PIK3CGP48736 1102 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 SELPLGQ14242 412 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 FXNQ16595 210 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 GAREM2Q75VX8 874 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 RALGPS2Q86X27 583 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 ZBTB2Q8N680 514 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 ACDQ96AP0 544 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 PPM1MQ96MI6 270 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 LRRC3Q9BY71 257 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 VCX3AQ9NNX9 186 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 INTS6Q9UL03 887 aaKnown RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 PLXNB3Q9ULL4 1909 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 RPL10P27635 214 aaKnown RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 RFC2P35250 354 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 ADGRG2Q8IZP9 1017 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 PAPD5Q8NDF8 572 aaKnown RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 ZNF296Q8WUU4 475 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 EGFL8Q99944 293 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 MRPL17Q9NRX2 175 aaKnown RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 FARSBQ9NSD9 589 aaKnown RBP19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 CRLS1Q9UJA2 301 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 MYRFQ9Y2G1 1151 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 NEUROG3Q9Y4Z2 214 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 V9GYQ6 96 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 CROCCQ5TZA2 2017 aa19.2■□□□□ 0.66
CDC42EP1-201ENST00000249014 CCDC160A6NGH7 325 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 NPIPB15A6NHN6 443 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 FFAR3O14843 346 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 GPR42O15529 346 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 SOCS5O75159 536 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 MT-ND1P03886 318 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 GABRR2P28476 465 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 MTPNP58546 118 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 SPRED1Q7Z699 444 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 FIBCD1Q8N539 461 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 BIRC7Q96CA5 298 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 RHBDF1Q96CC6 855 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 ZNF689Q96CS4 500 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 RMND5BQ96G75 393 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 C9orf16Q9BUW7 83 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 CD244Q9BZW8 370 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 CFAP97Q9P2B7 532 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 ANAPC2Q9UJX6 822 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 RNF103-CHMP3A0A140T963 221 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 ARNTLO00327 626 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 TEX28O15482 410 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 CKMP06732 381 aa19.19■□□□□ 0.66
CDC42EP1-201ENST00000249014 CSNK1DP48730 415 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms