RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 MAGEA3P43357 314 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 ABCG1P45844 678 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 MAPK9P45984 424 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 CD151P48509 253 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 PPM1FP49593 454 aaPredicted RBP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 TTPAP49638 278 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 RAB15P59190 212 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 PTK6Q13882 451 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 PPP1R7Q15435 360 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF449Q6P9G9 518 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 FOXR1Q6PIV2 292 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 LRRC69Q6ZNQ3 347 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 CLDN19Q8N6F1 224 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 RCBTB1Q8NDN9 531 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 OR6P1Q8NGX9 317 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 C12orf66Q96MD2 445 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 TSSK1BQ9BXA7 367 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 KIR3DX1Q9H7L2 352 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 OGFRQ9NZT2 677 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 TMEM9Q9P0T7 183 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 ANAPC5Q9UJX4 755 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 PSMD13Q9UNM6 376 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 PCDHGA3Q9Y5H0 932 aa12.49□□□□□ -0.41
VPREB3-201ENST00000248948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPREB3-201ENST00000248948 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 B4E171 279 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 CCDC188H7C350 402 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 IFRD1O00458 451 aaPredicted RBP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 HGFP14210 728 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 PAMP19021 973 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 ITIH1P19827 911 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 CSTF2P33240 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 TSPAN7P41732 249 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 CRADDP78560 199 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 PLOD1Q02809 727 aaPredicted RBP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 PLCL1Q15111 1095 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 RNF187Q5TA31 235 aaPredicted RBP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 ANKRD22Q5VYY1 191 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 CAPRIN2Q6IMN6 1127 aaKnown RBP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 SYDE1Q6ZW31 735 aaPredicted RBP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 MICALCLQ6ZW33 695 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 PRSS42Q7Z5A4 293 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 ARHGAP22Q7Z5H3 698 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 PDZD3Q86UT5 571 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 CREG2Q8IUH2 290 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 PPIL6Q8IXY8 311 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 CFAP206Q8IYR0 622 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 NAT8LQ8N9F0 302 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 KCNE4Q8WWG9 221 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 NCSTNQ92542 709 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 RSC1A1Q92681 617 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 DDA1Q9BW61 102 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 DPH1Q9BZG8 443 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
VPREB3-201ENST00000248948 OR52A5Q9H2C5 316 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 SAMD15Q9P1V8 674 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 FAM8A1Q9UBU6 413 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 EPHA6Q9UF33 1036 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 COLEC10Q9Y6Z7 277 aa12.48□□□□□ -0.41
VPREB3-201ENST00000248948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 CD3EAPO15446 510 aaKnown RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 AMD1P17707 334 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 OGNP20774 298 aaKnown RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ARNTP27540 789 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 NMBRP28336 390 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ETV5P41161 510 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 UCNP55089 124 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 SEMA3AQ14563 771 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 TYSND1Q2T9J0 566 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 SYTL3Q4VX76 610 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 RNASEH2BQ5TBB1 312 aaKnown RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 TMEM164Q5U3C3 297 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 MRNIPQ6NTE8 343 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 DUS1LQ6P1R4 473 aaKnown RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 PCGF5Q86SE9 256 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 HOOK3Q86VS8 718 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 LRRC6Q86X45 466 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 JAMLQ86YT9 394 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 LILRA3Q8N6C8 439 aaPredicted RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ELMO1Q92556 727 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 MFSD3Q96ES6 412 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ZDHHC12Q96GR4 267 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 C9orf72Q96LT7 481 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 CD180Q99467 661 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ZNF768Q9H5H4 540 aaKnown RBP12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ASIC3Q9UHC3 531 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 SLC24A2Q9UI40 661 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 GNPTGQ9UJJ9 305 aa12.47□□□□□ -0.41
VPREB3-201ENST00000248948 ZFYVE26Q68DK2 2539 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms