RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 STK40Q8N2I9 435 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 TTC16Q8NEE8 873 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 PDZD8Q8NEN9 1154 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 ADAMTS16Q8TE57 1224 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 NSMCE2Q96MF7 247 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 CHID1Q9BWS9 393 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 RNF38Q9H0F5 515 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 EBF1Q9UH73 591 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 ZNF711Q9Y462 761 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 SLC30A1Q9Y6M5 507 aa14.17□□□□□ -0.14
HIF3A-202ENST00000244303 PRMT5O14744 637 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 SCAMP3O14828 347 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 EFEMP2O95967 443 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ALPIP09923 528 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ITGB6P18564 788 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 MZF1P28698 734 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ALDH7A1P49419 539 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 CTBSQ01459 385 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ABRAXAS2Q15018 415 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ZBED5Q49AG3 693 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 RFTN2Q52LD8 501 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ABRAXAS1Q6UWZ7 409 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ADAMTSL2Q86TH1 951 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 TRIM74Q86UV6 250 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 TRIM73Q86UV7 250 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 OSCP1Q8WVF1 389 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 GFM2Q969S9 779 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ISOC1Q96CN7 298 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 PDLIM5Q96HC4 596 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 NPLQ9BXD5 320 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 VN1R3Q9BXE9 311 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 GPR63Q9BZJ6 419 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 TMEM45AQ9NWC5 275 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ZNF639Q9UID6 485 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 FAF1Q9UNN5 650 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 FCF1Q9Y324 198 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 PCDHB3Q9Y5E6 796 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 SCN5AQ14524 2016 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 DYTNA2CJ06 578 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 GRXCR2A6NFK2 248 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ANKRD28O15084 1053 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 FFAR2O15552 330 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 SEC24AO95486 1093 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 GUCA1CO95843 209 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 HMGA1P17096 107 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 CA5AP35218 305 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ARHGEF6Q15052 776 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 AP5B1Q2VPB7 878 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 ATXN7L2Q5T6C5 722 aaPredicted RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 PATL1Q86TB9 770 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 DTWD1Q8N5C7 304 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 BPIFB1Q8TDL5 484 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 OVCA2Q8WZ82 227 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 IPPKQ9H8X2 491 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 MAGEL2Q9UJ55 1249 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 TNPO3Q9Y5L0 923 aaKnown RBP14.16□□□□□ -0.14
HIF3A-202ENST00000244303 BACE2Q9Y5Z0 518 aa14.16□□□□□ -0.14
HIF3A-202ENST00000244303 C2orf78A6NCI8 922 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 FZD6O60353 706 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 CXCL10P02778 98 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 S100BP04271 92 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 HNRNPCP07910 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 CDH1P12830 882 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 HMOX2P30519 316 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 HSPA7P48741 367 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 PRMT2P55345 433 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 RHOAP61586 193 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 TRAF3Q13114 568 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 PTRHD1Q6GMV3 140 aaKnown RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 TMEM214Q6NUQ4 689 aaKnown RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 FAM151BQ6UXP7 276 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 RIMKLAQ8IXN7 391 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 CEP295NLQ96MC4 621 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 CGREF1Q99674 301 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 BDH2Q9BUT1 245 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 BOCQ9BWV1 1114 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 HIPK3Q9H422 1215 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 NSUN3Q9H649 340 aaKnown RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 ZMYM5Q9UJ78 669 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 CDC14AQ9UNH5 594 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 NEUROG3Q9Y4Z2 214 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 PCDHB1Q9Y5F3 818 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 ZNF106Q9H2Y7 1883 aaKnown RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 H0Y626 953 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 ARNTLO00327 626 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 IMPDH2P12268 514 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 BMP1P13497 986 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 HMGCLP35914 325 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 ATN1P54259 1190 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 PLCL1Q15111 1095 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 OTUD3Q5T2D3 398 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-202ENST00000244303 MILR1Q7Z6M3 343 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 SERPINA9Q86WD7 417 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 LKAAEAR1Q8TD35 194 aa14.15□□□□□ -0.14
HIF3A-202ENST00000244303 SNRNP27Q8WVK2 155 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms