RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PIANPQ8IYJ0 282 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 NAGSQ8N159 534 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 GPR150Q8NGU9 434 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 CCDC74AQ96AQ1 378 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 ZNF669Q96BR6 464 aaPredicted RBP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 CXorf40BQ96DE9 158 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 SIGLEC10Q96LC7 697 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 DEPDC7Q96QD5 511 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 PANX3Q96QZ0 392 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 SLC38A3Q99624 504 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 EBNA1BP2Q99848 306 aaKnown RBP11.07□□□□□ -0.64
SF3B6-201ENST00000233468 DPYSL5Q9BPU6 564 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 CCDC3Q9BQI4 270 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 EPB41L1Q9H4G0 881 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 PRDM8Q9NQV8 689 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 TBC1D29Q9UFV1 150 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 GNPTGQ9UJJ9 305 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 SNX24Q9Y343 169 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 HEBP2Q9Y5Z4 205 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 U3KQA8 63 aa11.07□□□□□ -0.64
SF3B6-201ENST00000233468 A0A087WV48 116 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 IFRD1O00458 451 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 LIN7AO14910 233 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 KPNA5O15131 536 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 SLC35G4P0C7Q5 338 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 MYF5P13349 255 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 XRCC1P18887 633 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 NDUFS1P28331 727 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 PBLDP30039 288 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 RPL21P46778 160 aaKnown RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 PPM1FP49593 454 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CDKN1CP49918 316 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 DRG2P55039 364 aaKnown RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 GPLD1P80108 840 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 B4GALNT1Q00973 533 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 HHEXQ03014 270 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 SPIDRQ14159 915 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 SYTL3Q4VX76 610 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 SPANXN3Q5MJ09 141 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 METRNLQ641Q3 311 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 PTRHD1Q6GMV3 140 aaKnown RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 RBM44Q6ZP01 1051 aaKnown RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CEP128Q6ZU80 1094 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CENPUQ71F23 418 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CFAP206Q8IYR0 622 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 OR10G6Q8NH81 332 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 GSDMBQ8TAX9 411 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 SLC37A2Q8TED4 501 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 AHCYL2Q96HN2 611 aaKnown RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 FAM167BQ9BTA0 163 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 FAM129AQ9BZQ8 928 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 FOXP3Q9BZS1 431 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 UCK1Q9HA47 277 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 EPB41L5Q9HCM4 733 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 C20orf96Q9NUD7 363 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 POT1Q9NUX5 634 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 INTS10Q9NVR2 710 aaKnown RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CPNE7Q9UBL6 633 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 SLC23A2Q9UGH3 650 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CLCA2Q9UQC9 943 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 PCDHB1Q9Y5F3 818 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 PCYT1BQ9Y5K3 369 aaPredicted RBP11.06□□□□□ -0.64
SF3B6-201ENST00000233468 ST14Q9Y5Y6 855 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 RNF215Q9Y6U7 377 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 COLEC10Q9Y6Z7 277 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
SF3B6-201ENST00000233468 A6NCN8 305 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 EIF3HO15372 352 aaKnown RBP eCLIP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 MT-CO3P00414 261 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ESR1P03372 595 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 RPS3P23396 243 aaKnown RBP eCLIP11.05□□□□□ -0.645e-9■□□□□ 9.6
SF3B6-201ENST00000233468 RPL10P27635 214 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ALDH4A1P30038 563 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 CA5AP35218 305 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ARCN1P48444 511 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 CD151P48509 253 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 EPHA4P54764 986 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ADARP55265 1226 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 MAZP56270 477 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 DHX9Q08211 1270 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ILF2Q12905 390 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 TARDBPQ13148 414 aaKnown RBP eCLIP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 NFE2L1Q14494 772 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 KRT33BQ14525 404 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 NR1D2Q14995 579 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 TMED2Q15363 201 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 SEPT7Q16181 437 aaKnown RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 KCTD19Q17RG1 926 aaPredicted RBP11.05□□□□□ -0.64
SF3B6-201ENST00000233468 HES3Q5TGS1 186 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 DUPD1Q68J44 220 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 KLHL35Q6PF15 583 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 CES3Q6UWW8 571 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 ZNF438Q7Z4V0 828 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 MMGT1Q8N4V1 131 aa11.05□□□□□ -0.64
SF3B6-201ENST00000233468 CLDN19Q8N6F1 224 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms