RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HDAC2Q92769 488 aaKnown RBP20.28■□□□□ 0.84
SNX3-201ENST00000230085 ISG20Q96AZ6 181 aaKnown RBP20.28■□□□□ 0.84
SNX3-201ENST00000230085 BTN2A3PQ96KV6 586 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 RIPOR3Q96MK2 946 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 ZNF347Q96SE7 839 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 SLC30A3Q99726 388 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 UNKQ9C0B0 810 aaKnown RBP20.28■□□□□ 0.84
SNX3-201ENST00000230085 AIG1Q9NVV5 245 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 NAALAD2Q9Y3Q0 740 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 ZNF711Q9Y462 761 aa20.28■□□□□ 0.84
SNX3-201ENST00000230085 A0A1W2PRU2 124 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 FAM149AA5PLN7 773 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 PIP5K1BO14986 540 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 SUPT3HO75486 399 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 BCL10O95999 233 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 CDH1P12830 882 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 SMAD4Q13485 552 aaKnown RBP20.27■□□□□ 0.84
SNX3-201ENST00000230085 ARHGAP36Q6ZRI8 547 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 NEK10Q6ZWH5 1172 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 AADATQ8N5Z0 425 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 ITFG1Q8TB96 612 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 USP33Q8TEY7 942 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 PTERQ96BW5 349 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 AURKBQ96GD4 344 aaPredicted RBP20.27■□□□□ 0.84
SNX3-201ENST00000230085 ZNF641Q96N77 438 aaPredicted RBP20.27■□□□□ 0.84
SNX3-201ENST00000230085 ATOH8Q96SQ7 321 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 SLC39A8Q9C0K1 460 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 FBXO44Q9H4M3 255 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 ALG9Q9H6U8 611 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 NANOGQ9H9S0 305 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 RBM22Q9NW64 420 aaKnown RBP eCLIP20.27■□□□□ 0.84
SNX3-201ENST00000230085 ZIM2Q9NZV7 527 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 LEF1Q9UJU2 399 aaPredicted RBP20.27■□□□□ 0.84
SNX3-201ENST00000230085 PCDHB3Q9Y5E6 796 aa20.27■□□□□ 0.84
SNX3-201ENST00000230085 FAM92AA1XBS5 289 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 K7EPI3 171 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 DFFAO00273 331 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 IRAK2O43187 625 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 F11P03951 625 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 MTHFD2P13995 350 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 MTHFRP42898 656 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PGFP49763 221 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PLK1P53350 603 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 CDKN2DP55273 166 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 EMX2Q04743 252 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 XKR7Q5GH72 579 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PRSS36Q5K4E3 855 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 GRAMD4Q6IC98 578 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 C16orf87Q6PH81 154 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 XKR5Q6UX68 686 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 SNX31Q8N9S9 440 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 FBXO32Q969P5 355 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 KCTD14Q9BQ13 255 aaPredicted RBP20.26■□□□□ 0.83
SNX3-201ENST00000230085 MROQ9BYG7 248 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 TUBB1Q9H4B7 451 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PFDN4Q9NQP4 134 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 INIPQ9NRY2 104 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 UXTQ9UBK9 157 aaPredicted RBP20.26■□□□□ 0.83
SNX3-201ENST00000230085 EGFL7Q9UHF1 273 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 POLG2Q9UHN1 485 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 MAGEL2Q9UJ55 1249 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PCDHGA11Q9Y5H2 935 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 SNX10Q9Y5X0 201 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 ATP6AP2A0A1C7CYW4 349 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 CFAP99D6REC4 459 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 MOSPD3O75425 235 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 ATP6AP2O75787 350 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PEX11BO96011 259 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 ALBP02768 609 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 HOXB6P17509 224 aaKnown RBP20.26■□□□□ 0.83
SNX3-201ENST00000230085 CDH3P22223 829 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 MAP4P27816 1152 aaKnown RBP20.26■□□□□ 0.83
SNX3-201ENST00000230085 OXCT1P55809 520 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 LIPEQ05469 1076 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 BNIP3Q12983 259 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 LCP2Q13094 533 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 GRB7Q14451 532 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 ING5Q8WYH8 240 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 SLC35B4Q969S0 331 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 PSD2Q9BQI7 771 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 COMMD8Q9NX08 183 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 SCML2Q9UQR0 700 aa20.26■□□□□ 0.83
SNX3-201ENST00000230085 MRPS23Q9Y3D9 190 aaKnown RBP20.26■□□□□ 0.83
SNX3-201ENST00000230085 ASPDHA6ND91 283 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 C16orf96A6NNT2 1141 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 TMX2-CTNND1H3BSU7 103 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 UPK1AO00322 258 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 INPP4BO15327 924 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 DEAF1O75398 565 aaPredicted RBP20.25■□□□□ 0.83
SNX3-201ENST00000230085 SNAP29O95721 258 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 ALPLP05186 524 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 UGT2B4P06133 528 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 MATN1P21941 496 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 FSHRP23945 695 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 CHRNA4P43681 627 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 ARSFP54793 590 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 DAG1Q14118 895 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 GPR158Q5T848 1215 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 PTCRAQ6ISU1 281 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms