RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ART5Q96L15 291 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 OCEL1Q9H607 264 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 TMLHEQ9NVH6 421 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 AASSQ9UDR5 926 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 MAP4K5Q9Y4K4 846 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 ACTL7AQ9Y615 435 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 NME4O00746 187 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 INSIG1O15503 277 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 KPNA6O60684 536 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 CD36P16671 472 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 FEN1P39748 380 aaKnown RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 CDH12P55289 794 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 FOXA1P55317 472 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 OR4D2P58180 307 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 FAM189BP81408 668 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 DEF8Q6ZN54 512 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 HS3ST5Q8IZT8 346 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 SPATA2Q9UM82 520 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 PMF1-BGLAPU3KQ54 211 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 K7EPI3 171 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 SLC28A1O00337 649 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 SAP18O00422 153 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 FPGTO14772 594 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 DFNA5O60443 496 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 SNX4O95219 450 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 KRT20P35900 424 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 EPHB3P54753 998 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 KCNAB2Q13303 367 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 TECRLQ5HYJ1 363 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PRSS55Q6UWB4 352 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PTCHD4Q6ZW05 846 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PSD4Q8NDX1 1056 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 OR52B6Q8NGF0 335 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 KAT2AQ92830 837 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 GTF2IRD1Q9UHL9 959 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PSME2Q9UL46 239 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 ERAL1O75616 437 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 IFNA14P01570 189 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CATP04040 527 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 URODP06132 367 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 UMPSP11172 480 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 TUFMP49411 452 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 ADAM17P78536 824 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CHIT1Q13231 466 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 SNX29P2Q8IUI4 249 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 LEMD2Q8NC56 503 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 OR4F6Q8NGB9 312 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 OLIG1Q8TAK6 271 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 MRGPRX2Q96LB1 330 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 COQ7Q99807 217 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 WDR12Q9GZL7 423 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 MAGEE1Q9HCI5 957 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CLEC4AQ9UMR7 237 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CENPXA8MT69 81 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PIRO00625 290 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 FFAR2O15552 330 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CAPN3P20807 821 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 GKP32189 559 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 ARSFP54793 590 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 FCGRTP55899 365 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PMS2P3Q13401 168 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 ZSWIM7Q19AV6 140 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CYP27C1Q4G0S4 372 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 UNC50Q53HI1 259 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 AKAP14Q86UN6 197 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 C2CD4AQ8NCU7 369 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CNIH3Q8TBE1 160 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 C1GALT1C1Q96EU7 318 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 LRCH3Q96II8 777 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 TCF25Q9BQ70 676 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 C16orf70Q9BSU1 422 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 MKS1Q9NXB0 559 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 MALT1Q9UDY8 824 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 A0A0G2JLL6 359 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 C7orf72A4D263 438 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 GBAP04062 536 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CDK4P11802 303 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 DDX5P17844 614 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 SLC6A2P23975 617 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PTPN5P54829 565 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 YBEYP58557 167 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CDC42P60953 191 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 COPZ1P61923 177 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 KRR1Q13601 381 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 TMEM236Q5W0B7 351 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 STEAP4Q687X5 459 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 ANKS3Q6ZW76 656 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PIWIL3Q7Z3Z3 882 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 PRRT2Q7Z6L0 340 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 WDR36Q8NI36 951 aaKnown RBP13.54□□□□□ -0.24
NFKB1-201ENST00000226574 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 TOP1MTQ969P6 601 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 SMIM14Q96QK8 99 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 COPS4Q9BT78 406 aa13.54□□□□□ -0.24
NFKB1-201ENST00000226574 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms