RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CCDC25Q86WR0 208 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 CCNJLQ8IV13 435 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 PHC3Q8NDX5 983 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 OR6C4Q8NGE1 309 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 IFT81Q8WYA0 676 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 ELMO1Q92556 727 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 RMDN2Q96LZ7 410 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 SARS2Q9NP81 518 aaKnown RBP14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 KLK13Q9UKR3 277 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 ACSL5Q9ULC5 683 aa14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 ATXN7L1Q9ULK2 861 aaPredicted RBP14.1□□□□□ -0.15
SUPT4H1-201ENST00000225504 SLC5A10A0PJK1 596 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 OR5K4A6NMS3 321 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 PIAS1O75925 651 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 FTH1P02794 183 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 RPLP0P05388 317 aaKnown RBP14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 PNLIPP16233 465 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 RPS3P23396 243 aaKnown RBP eCLIP14.09□□□□□ -0.153e-9■■■■■ 37.6
SUPT4H1-201ENST00000225504 CD1CP29017 333 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 SSTR1P30872 391 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 BIRC2Q13490 618 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 AMZ1Q400G9 498 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 DNTTIP2Q5QJE6 756 aaKnown RBP14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 HES3Q5TGS1 186 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 CDCP2Q5VXM1 449 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 PTRHD1Q6GMV3 140 aaKnown RBP14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 CNSTQ6PJW8 725 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 TMPRSS7Q7RTY8 843 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 TMPRSS9Q7Z410 1059 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 SLC9B2Q86UD5 537 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 VRK3Q8IV63 474 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 FAM136AQ96C01 138 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 CERS2Q96G23 380 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 C9orf72Q96LT7 481 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 SCNM1Q9BWG6 230 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 OR52A5Q9H2C5 316 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 LRRN3Q9H3W5 708 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 SLC40A1Q9NP59 571 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 MOCS1Q9NZB8 636 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 UNC13CQ8NB66 2214 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 NCOR2Q9Y618 2525 aa14.09□□□□□ -0.15
SUPT4H1-201ENST00000225504 KLHL33A6NCF5 533 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 NTN3O00634 580 aaPredicted RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 NIPSNAP2O75323 286 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 MT-CO3P00414 261 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 VIPP01282 170 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 AHSGP02765 367 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 RHOXF2BP0C7M4 288 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 SLC2A4P14672 509 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 AOAHP28039 575 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 HALP42357 657 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 MAGEA4P43358 317 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 ABCG1P45844 678 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 GPX6P59796 221 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 CFHR1Q03591 330 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 BOP1Q14137 746 aaKnown RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 NR1D2Q14995 579 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 LRRC6Q86X45 466 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 C2CD4AQ8NCU7 369 aaPredicted RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 JPH3Q8WXH2 748 aaPredicted RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 CXorf40BQ96DE9 158 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 C12orf66Q96MD2 445 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 NRTNQ99748 197 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 RHOXF2Q9BQY4 288 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 TBC1D10AQ9BXI6 508 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 SYNDIG1Q9H7V2 258 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 VPS37BQ9H9H4 285 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 PPANQ9NQ55 473 aaKnown RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 SMYD2Q9NRG4 433 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 FAM114A2Q9NRY5 505 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 IMP3Q9NV31 184 aaKnown RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 INTS10Q9NVR2 710 aaKnown RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 CDYLQ9Y232 598 aa14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 COL27A1Q8IZC6 1860 aaPredicted RBP14.08□□□□□ -0.16
SUPT4H1-201ENST00000225504 IGHV1OR21-1A0A087WYE8 117 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 QSOX1O00391 747 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 SLC35G4P0C7Q5 338 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 MTHFD1P11586 935 aaKnown RBP14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 CDK4P11802 303 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 PKMP14618 531 aaKnown RBP14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 HOXB3P14651 431 aaPredicted RBP14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 JUPP14923 745 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 ECHS1P30084 290 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 GPR3P46089 330 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 HSPA14Q0VDF9 509 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 UBAP2Q5T6F2 1119 aaKnown RBP14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 ZNF574Q6ZN55 896 aaPredicted RBP14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 TRIM48Q8IWZ4 208 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 PALM2Q8IXS6 379 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 LMNTD2Q8IXW0 634 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 CALML6Q8TD86 181 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 SLC38A3Q99624 504 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 SLC30A3Q99726 388 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 FAM167BQ9BTA0 163 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 RDH14Q9HBH5 336 aa14.07□□□□□ -0.16
SUPT4H1-201ENST00000225504 KCNK4Q9NYG8 393 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms